Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0794 ATGGCACCAAAACCAGTTGCCCATTCCTATCTACTCCTTTTAATCTTGTTTCTTGTCATCCAACTTTCTGAGCAGTTAGAGTTTTCTCAGTCTCAGACACTTCTCAAAGTTGAACAACTTCTTGGCTATCCATCAGCACTAGGAAGCTTCAGCAGCACCACAGATTTTTGCAACATTGAACCTACCCAATATTTGACACTAGTCTGCTACGAGGACAGCTTGACACAGCTGCATGTTGTTGGCAACAATGTGTTTACCTCATTGCCTCAAAATTTTTCATCAGACACTCTATTTGCCACACTAGGTAGTCTATCAAGCTTGAAAGTCCTCTCTTTGGTTTCTTTGGGTCTCTGGGGGTCTCTACCTGAAAGCATTGCTCAGTTATCTTCATTGGAAATACTTAACATTAGTTCAAATCACTTCAATGGAGCTATTCCAGCTCAACTTTCACTTCTGAGGAACCTACAGTCAGTGGTACTTGATGATAACAACTTCAATGGTCAAATTCCAAACTGGATAGGGTCCCTTCAAGGTTTGGCTGTTCTAAGTATGAAGAACAACTGGCTTAGTGGGAACCTGCCAACTTCAGTGAATGCTCTTCATACCTTGAGAGTTTTAGATCTATCAAATAATCAGTTATCTGGGGAACTACCACATCTTCACCATTTGGAAAACCTTCAAGTACTTCACTTGGAAAACAACACATTTGGACCTCATTTTCCTTCTCTCCCCACCAAGTTAGTTTCTCTTGTGCTTAGAAATAACAGCTTCAGGCTTGGTGTCCCTTCTGATTTAAGCTCCTTCTATCAGCTCCAAAAGCTGGACCTCTCATTGAATGGTTTTGTGGGGCCATTTTCACCATCTTTATTGTCACTACCTTCCATCAATTACCTTGATATTTCTTCAAATAAATTCACTGGGATGCTTTACAATAACTTGTCATGCAATGATGATCTCCACTTTGTAAATTTATCTTCAAATCTTCTGAAAGGGGAACTTCCCACTTGTTTAGAACCAAAGACCAGGGTTGTTTTGTATGCCAGAAACTGCTTATCAAACAAGAACCAAGATCAGCACCCTTCAGATTTCTGCAGCAATGAGGCATTGGCAGTGAGAATTATACCTCATCAACAGAAGCACAAGAGAACAACTGGTAAAGCAGTGCTTGTGTCTAGTATGGGAGGTGTTGTTGGTGGAGTGTTGATTTTGGGAGTGGTTGTTTTGGTTGTTAGCAGAGTTCATAAGAAAGAAGTTGTGAAGACACCCTCAAGGTCCATAATAGAACATGTATCATCAGCAAACACAGCAAAACTACTCACAGATGCAAGGTATATATCAGAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGACGAACTTAAGGAAGCTACAAATAATTTTGATGAATCATATTTCATAAGTGAAGGCCCACATGGTCAGATATATAAAGGGGTGCTCTCTGATGGAATGAATATTGCTATTAGGAGTTTGAAAATAAGAAAGAGACACAGTCCTCAGTCCTATATGCACCAGGTTGAGTTGATTTCGAAGCTTAGGCATTCACACTTGGTGAGTGCTCTTGGGCATTCTTTTGAGTGCAACCAGGATGATTCATGTGTAAACACTATCCATCTCATATTTGAGTTTGTTCCAAACAGAAGTTTAAGAAGCTATGTCTCTGGATCTTCTGGGGAAAAGCTTTCTTGGACTCAGAGAATAGCAGCTGCAATTGGAGTGGCGAAAGGCATTCAATTTTTGCACACAGGGATAGTGCCTGGACTATACCTAAATAATTTGAAGATAACAGATATTCTTTTGGATAGCAATCATAATGTTAAAATAAGCAGTTATAATCTGCCACTCTCTTCTGAAAATAAAAGAATGGGTAGCAATGGAACATCCCCTGGATTAAAAGGAAATGTCCAAGCAAGGATAAAGGATGCAGACAAGAATGATATCTATGATATTGGAGTAATCTTGCTAGAAATCATTCTGGGACGACCAATAATGTTCCACAATGAAGTTGGAACATTAAAGGATCTTTTACATGTCAGCATCAAAACTGATGATATAGCTAGGAGGAGTATTGTTGATCCAGTAGTTCATAAGGAGTGTTCAGATGAATCATTAATGACAATGATGGATATATGTGTAAGGTGTCTCTCTAGTGAACCAAATGAAAGGCCTTCTGTGGAAGATATTCTCTGGAATTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAGAAGAGACTCAAATGATCACAGAGAATCACCTGCATCATCTTCTAAGGAGACATAA 2319 0.3954 MAPKPVAHSYLLLLILFLVIQLSEQLEFSQSQTLLKVEQLLGYPSALGSFSSTTDFCNIEPTQYLTLVCYEDSLTQLHVVGNNVFTSLPQNFSSDTLFATLGSLSSLKVLSLVSLGLWGSLPESIAQLSSLEILNISSNHFNGAIPAQLSLLRNLQSVVLDDNNFNGQIPNWIGSLQGLAVLSMKNNWLSGNLPTSVNALHTLRVLDLSNNQLSGELPHLHHLENLQVLHLENNTFGPHFPSLPTKLVSLVLRNNSFRLGVPSDLSSFYQLQKLDLSLNGFVGPFSPSLLSLPSINYLDISSNKFTGMLYNNLSCNDDLHFVNLSSNLLKGELPTCLEPKTRVVLYARNCLSNKNQDQHPSDFCSNEALAVRIIPHQQKHKRTTGKAVLVSSMGGVVGGVLILGVVVLVVSRVHKKEVVKTPSRSIIEHVSSANTAKLLTDARYISETMKMGASLPAYRTFALDELKEATNNFDESYFISEGPHGQIYKGVLSDGMNIAIRSLKIRKRHSPQSYMHQVELISKLRHSHLVSALGHSFECNQDDSCVNTIHLIFEFVPNRSLRSYVSGSSGEKLSWTQRIAAAIGVAKGIQFLHTGIVPGLYLNNLKITDILLDSNHNVKISSYNLPLSSENKRMGSNGTSPGLKGNVQARIKDADKNDIYDIGVILLEIILGRPIMFHNEVGTLKDLLHVSIKTDDIARRSIVDPVVHKECSDESLMTMMDICVRCLSSEPNERPSVEDILWNLQFAAQVQNSWRRDSNDHRESPASSSKET* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0794 772 Gene3D Ribonuclease Inhibitor 242 359 IPR032675 -
Apr5g0794 772 MobiDBLite consensus disorder prediction 753 772 - -
Apr5g0794 772 Pfam Leucine Rich repeats (2 copies) 202 234 IPR025875 -
Apr5g0794 772 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Apr5g0794 772 Gene3D Ribonuclease Inhibitor 149 241 IPR032675 -
Apr5g0794 772 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 763 - -
Apr5g0794 772 Gene3D Transferase(Phosphotransferase) domain 1 556 769 - -
Apr5g0794 772 ProSiteProfiles Protein kinase domain profile. 473 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0794 772 Pfam Protein tyrosine and serine/threonine kinase 479 742 IPR001245 GO:0004672|GO:0006468
Apr5g0794 772 SUPERFAMILY RNI-like 69 341 - -
Apr5g0794 772 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 763 - -
Apr5g0794 772 Gene3D Phosphorylase Kinase; domain 1 433 547 - -
Apr5g0794 772 Gene3D Ribonuclease Inhibitor 29 148 IPR032675 -
Apr5g0794 772 SUPERFAMILY Protein kinase-like (PK-like) 452 746 IPR011009 -
Apr5g0794 772 MobiDBLite consensus disorder prediction 755 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0794 Apr-Chr5 11423323 11428298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0794 43 769 Miscellaneous Gene Families AT3G03770 56.428 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Apr5g0794 PK_Tyr_Ser-Thr 2.5e-17 CL0016