Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0787 ATGGCTTTCAGACCAAGAACACCAACTTTCCGTTCCCAACCTTCTAGTCGTAGCGTGTATGAGGTCATGCAGCCCCGCTCAGAGACAAAAGAAACCCCAGAGGCATACCTTCTGCATGTTTATATTCCCGGTTTTTCAAGGGATAGTGTAAAGATTACATATGTGGAATCTTCACGGATGGTGAGGATCACAGGAGAAAGACGAATCCATGGTAACAGATGGAGTAAATTTGACCAATCATATCCTATTCCGGTAGATTCTGTGGCCGAGAAACTTCAGGGAAAGTTTGAAATTGGAACTCTCATCATTACAATGCCAAAGGTCACTCCCCAAGTTGATCCTAAACAACCAGAAATAGAAACAACCCAAGAGAAAGGTGTAACTGAACCAAAGCCTTACGAAAAAGGCCAAGAAACGATTCCATCACAACCTACAACTACTAAAGTTGAAGAACCAATTGAAGACAAGAAAAGTGCTTCACTCCCAAGTCCTGTAAAAGAGCCAGCTGACTTAAAGGCACAAACGGCTACTCGTGAAGACACATCGTCTCAAATCCCTCCTGATCCAATTAAGGACTATATCTCCCGAAAGGGTCAAGAAGAAGATGTAGAAAGATCCACAGAAATAGGTAAGCCACAAAAGGGTCGAGATGAAGTTGAACCAAAACCAACAATGGCAGCCAAAATACAAGCAGATGAAGAACCTCAAAAAGGTCAAGAGGAATTTGAGCCAAAACCAACACCAGCAATGACAACCAAAATGCAACCAGATGAAGAGCCTCAAAAGGGTCAAGAGGAATTTGAGCCAAAACCAACACCAGCAATGACAACCAAAATGCAACCAAATGAAGAGCCTCAAAAGAGTCAGGAGGAATTTGGGCCAAAATCAGCACCAACAATGGCTACCAAAATAAAAACAAATGAGAAACCTCAAAAGGGTCAAGATGAAGGTGAGCCAAAACCTACACCTTCTACTGTTACCAGAAAGCCAACAGACATTGGAGTAAAGACTACGCTTTCAACAGTTCAAAAGCAGTTAGAGGAAAAGAAAATAGAGGGAACTGGTGCTAAATATGAAGAGACGGAAAGGATCTCAAGGAAGGAAGTTAAAGAGGAAGATAATGGGAAGCCTTCTGAGTCAAGAAATCCTGTGAAAGACAAGGAGAAGGGTAGTTTTAAAGAAAAAGAAACCATGGCAAAAAAATTGTCATCCAAGGTAGCAGAATCTTCGGCTCCAAAAGTTCCTAAGAAAGAAAAGGAATCTAGAACTGCTCCCAAAAAGGAAGAAAAGAGTAAAGAGGATACCAGGGACACTGAAAAAAACGGAATCAGAGAATTGGCTTGTGCTGCTTCCCAAGTTGTCACAAGAATAACAGAAGGGAAATGGAATGAGCAAGAGAAACATTTAGCTACAAATATTGGTGCTGCAGTTCTGGTGATTGCTGCATTGGGAGCTTATAGAGAGAAGAATGGAGAATTCGAGAAGGCTACAAGAAGAGTCAAAAGAGTTTTGAGTGAAGGAATTGGTTTGGTTGTGTTTCGTTGGTCAGCTCTTCAAACGGTTGTTGAGAACGAATGGGGTGGGCATCAGTCACGTCTCAAAGCTCATCAACTTGCCCTCACATACTTTCATGGTTCACTCAATCCAAAGATTGTGAATGATGATGAAGATGGTGATGATGACGAAAACATTATTGGAGACAACAATACTTCATACATGAATGTGGATATTCCAACATCTGAATTGAACACAAATTCAGTGAACATGCAAGTAAATGGCCCTTTGCCGGAGGTTGCAGCTTATGCTATTGAAATTTGA 1818 0.4142 MAFRPRTPTFRSQPSSRSVYEVMQPRSETKETPEAYLLHVYIPGFSRDSVKITYVESSRMVRITGERRIHGNRWSKFDQSYPIPVDSVAEKLQGKFEIGTLIITMPKVTPQVDPKQPEIETTQEKGVTEPKPYEKGQETIPSQPTTTKVEEPIEDKKSASLPSPVKEPADLKAQTATREDTSSQIPPDPIKDYISRKGQEEDVERSTEIGKPQKGRDEVEPKPTMAAKIQADEEPQKGQEEFEPKPTPAMTTKMQPDEEPQKGQEEFEPKPTPAMTTKMQPNEEPQKSQEEFGPKSAPTMATKIKTNEKPQKGQDEGEPKPTPSTVTRKPTDIGVKTTLSTVQKQLEEKKIEGTGAKYEETERISRKEVKEEDNGKPSESRNPVKDKEKGSFKEKETMAKKLSSKVAESSAPKVPKKEKESRTAPKKEEKSKEDTRDTEKNGIRELACAASQVVTRITEGKWNEQEKHLATNIGAAVLVIAALGAYREKNGEFEKATRRVKRVLSEGIGLVVFRWSALQTVVENEWGGHQSRLKAHQLALTYFHGSLNPKIVNDDEDGDDDENIIGDNNTSYMNVDIPTSELNTNSVNMQVNGPLPEVAAYAIEI* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0787 605 PANTHER HEAT SHOCK PROTEIN 26 282 487 IPR045045 -
Apr5g0787 605 PANTHER HEAT SHOCK PROTEIN 26 2 226 IPR045045 -
Apr5g0787 605 MobiDBLite consensus disorder prediction 343 402 - -
Apr5g0787 605 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 2 226 - -
Apr5g0787 605 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 282 487 - -
Apr5g0787 605 MobiDBLite consensus disorder prediction 318 342 - -
Apr5g0787 605 Pfam Hsp20/alpha crystallin family 29 119 IPR002068 -
Apr5g0787 605 MobiDBLite consensus disorder prediction 193 223 - -
Apr5g0787 605 Pfam Pre-rRNA-processing protein TSR2 505 539 IPR019398 -
Apr5g0787 605 Gene3D - 2 121 IPR008978 -
Apr5g0787 605 MobiDBLite consensus disorder prediction 291 307 - -
Apr5g0787 605 MobiDBLite consensus disorder prediction 109 442 - -
Apr5g0787 605 MobiDBLite consensus disorder prediction 118 132 - -
Apr5g0787 605 CDD ACD_sHsps-like 30 107 - -
Apr5g0787 605 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 122 IPR002068 -
Apr5g0787 605 MobiDBLite consensus disorder prediction 411 442 - -
Apr5g0787 605 SUPERFAMILY HSP20-like chaperones 19 119 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0787 Apr-Chr5 11287799 11291458 Dispersed