Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0777 ATGTTGACATTAGTTCTTGGACTAGCTTCAGCCACTCTGTTAGTGATTGTTTCAGTCTATGTGTTCTTTTACAAGAGCAGAATATCAAAACATGAGGTTAAAGACATTGAAAGTTCAGAACAAAAGGAGGAGGAAGAGGTGGCTCAGAAGGAGGACTTGATCATCTTTCAAGGTGGAGAGGACCTTACAATATGTGACATATTAGATGCTCCAGGGGAAGTGATTGGGAAATCCAACTATGGCACACTGTATAAGGCTTTGTTGCAAAGGAGCAACAAGGTGAGGTTGCTGAGGTTTCTGAGACCAGTGTGCACCACAAGGGGCGAAGAATTGGATGAAATGATTCAGTTTCTTGGAAGGATAAGGCATCCTAATTTGGTTCCTCTTCTGGGTTTCTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCTTTCTATCGGCATGGGAATCTGACTCAGTTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATGTAAAATATCCATTGGTATAGCCAAAGGATTAGAGCATCTTCACACATCACATCAGAAGCCTATTATCCATGGAAACCTCAAATCTAAAAACATCCTTTTGGACCGCTCGTGCCAACCGAGCATCTCAGATTCTGGTCTACATCTTCTGTTGAATCCTACTGCTGGCCAAGAAATGCTTGAAAGTTCAGCTGCACAGGGTTACAAGGCACCTGAGCTTATCAAAATGAAGGATGCTAGTGAAGAAGGTGACATATATAGCCTTGGTGTGATCTTGCTGGAATTGCTTTCAGGGAAGGAACCTATCAATGAACATCCTACTCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCTGTACTTGGACACAGAATTGCTGATTTGTACCATCCAGCCATTCTTCTTAGAAACAGCAGAGATGATAAGATTCCAGTTACAGAAGAATGTATTCTCAAATTTTTCCAACTTGCTATGGCTTGTTGCTCCCCTTCACCCTCAGTTAGACCTAACATAAAGCAAGTCCTTAAGAAGCTTGAAGAAATCTTATTCTAG 1065 0.415 MLTLVLGLASATLLVIVSVYVFFYKSRISKHEVKDIESSEQKEEEEVAQKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRGEELDEMIQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGECYKWSNICKISIGIAKGLEHLHTSHQKPIIHGNLKSKNILLDRSCQPSISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDASEEGDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILLRNSRDDKIPVTEECILKFFQLAMACCSPSPSVRPNIKQVLKKLEEILF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0777 354 Coils Coil 33 53 - -
Apr5g0777 354 SUPERFAMILY Protein kinase-like (PK-like) 72 350 IPR011009 -
Apr5g0777 354 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0777 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 352 - -
Apr5g0777 354 Gene3D Transferase(Phosphotransferase) domain 1 148 354 - -
Apr5g0777 354 Pfam Protein tyrosine and serine/threonine kinase 73 349 IPR001245 GO:0004672|GO:0006468
Apr5g0777 354 Gene3D Phosphorylase Kinase; domain 1 69 146 - -
Apr5g0777 354 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0777 Apr-Chr5 11068167 11071474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0777 35 352 Carbohydrate Esterase AT5G61570 61.846 5.24e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr5g0777 PK_Tyr_Ser-Thr 2.8e-32 CL0016