Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0776 ATGTCATTTTCCTGTGGCAAAAAATTTTTCAAGAGGTTCTGTGTGGATGAATTCCAAATGGGAAGTCTTCCGTATAGCAGTTTTTTGTCTAATGATCTATTGCCATCCCTTGGAGCCAGAATCAACCAAGAAACAAGACTAAGAAGATACATAATTTCCCCTTTCAATCCACGTTATAGGGCTTGGGAGATGCTACTAATTGTTCTAGTTGTTTACTCTGCATGGATTTGCCCATTTGAATTTGCCTTTCTGCCTTACAAGCAAGACACACTATTCATCATAGACAACATTGTAAATGCCTTCTTTGCCATTGACATCATGCTTACATTCTTTGTTGCATACCTTGATAGCCATTCTTACCTTCTTGTTGATGATCCCAAGAAAATTGCAGTCAGGTACATATCAACCTGGTTTATCTTTGATGTCTGTTCAACTGCACCTTTCCAATCCATTAGCCTCCTCTTCACGGATCACAGTAGTGAGATTGGCTTCAAAATTCTTAACATGCTTCGGTTATGGCGCCTGAGACGAGTCAGTTCTCTGTTTGCAAGACTTGAGAAGGACATTCGCTTCAATTACTTCTGGACTAGGTGCTCAAAGCTCATTGCTGTAACCTTGTTTGCTGTGCACTGTGCTGGATGCTTCAACTATCTGATAGCAGATAGGTACCCAGATTCAAAAAGGACTTGGATTGGTTCTGTGTACCCAAATTTCAAAGAAATGAGTCTATGGGAAAGATATGTGACAGCCATATATTGGTCCATTGTCACACTTACTACCACTGGGTATGGGGATTTGCATGCAGAAAACACAAGAGAGATGTTGTTTGATATCTTCTACATGCTGTTCAACCTGGGATTAACATCATACATCATTGGAAACATGACAAACTTGGTAGTCCATTGGACAAGCCGCACCAGAAATTTTAGAGATACAGTCAGAGAAGCTTCAGAATTTGCATCAAGAAATCAGCTGCCCCATCACATCCAGGATCAAATGTTGTCACACTTATGTTTGAGGTTCAAAACAGAAGGGTTGAAGCAGCAAGAAACACTAAATGGCATGCCAAAGGCAATTCGTGCAAGCATTGCTCACCATCTATTCTTTCAAGTTGTGCAAAGGGTCTACCTCTTCCAAGGAGTCTCACATGACTTTCTTTTCCAGCTGGTTATAGAGATGGAAGCTGAGTATTTCCCACCCAAGGAAGATGTTATACTACAAAATGAGTCTCCTACCGACCTATATATACTGGTTTCAGGGGCAGTGGATCTCATCCGCTCTGTTGATGGCCATGATCAAGTTCTGAAGCATTCTACTGCAGGAGATACACTTGGAGAAATTGGAGTTTTATACTGTAGACCACAACCTTTCACTGTTCGGACCACCGAGCTTTCTCAAATTTTAAGACTCAGCAGAACTTCATTGATGAATGCCATACATGCAAATCCAAAAGCAGCACAAATTATAATGAAAAATCTTTTAATGAGCTTAAAGGGTTATCAAGGATTGGATTTTTCGTATCCACCTATAGACCCTGAATTGGATCTTCACCAAATTCATGATTGGGACAACACAGGAGGAAGCTCTTCTGATGGATTTACAAATAGTTCATACGAGGAAGCCAGATTGCATAACATGATTCCTGAAGATGGAAAAAGAGATCTTTATGCTACTGCTCACATAGGTCATCCTAACATGGAAGCAAATGAAAAGAACTTAAACCCCATAAGATGGAAACAGAAACCTCTAGTAGAGCAGCAACAAAACCAGAGCATTTCTGACCTTGCAATGAATCATGAAAATAGAAAGACACTAGATGAACATATAATAGAGTTTGTGGAGCCACAAATCCTTAACCATACTAAGAATGACCCAACTAGAGAAAAAGATGTTCTTAGAACTGTCAACCACCCTTTAGGAAAACCATTCACAAACTCCTATTCAAGCAACTCCAATTATAGAACTGATAGAGAAGCACAAGTATTATTCAAAAAGAGAGTTACCATCCACTTTCTAAGCAAACACAGACCTTCCTTACAGGATCAGCATGGGAAGTTGATTATTTTACCTGATTCATTAGAAGATCTGCTCAAAATTGCTGGAGAAAAGTTTGGAGGCTCCAAGCCTACAAAAGTAATTAATACTGAGAATGCGGAGATAGATGATATTAGTGTCATTCGAGATGGTGATCATCTATTTTTTCTTTCAAGTGACAGTGAAAATTTAAGTTCATAA 2235 0.3933 MSFSCGKKFFKRFCVDEFQMGSLPYSSFLSNDLLPSLGARINQETRLRRYIISPFNPRYRAWEMLLIVLVVYSAWICPFEFAFLPYKQDTLFIIDNIVNAFFAIDIMLTFFVAYLDSHSYLLVDDPKKIAVRYISTWFIFDVCSTAPFQSISLLFTDHSSEIGFKILNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCSKLIAVTLFAVHCAGCFNYLIADRYPDSKRTWIGSVYPNFKEMSLWERYVTAIYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVREASEFASRNQLPHHIQDQMLSHLCLRFKTEGLKQQETLNGMPKAIRASIAHHLFFQVVQRVYLFQGVSHDFLFQLVIEMEAEYFPPKEDVILQNESPTDLYILVSGAVDLIRSVDGHDQVLKHSTAGDTLGEIGVLYCRPQPFTVRTTELSQILRLSRTSLMNAIHANPKAAQIIMKNLLMSLKGYQGLDFSYPPIDPELDLHQIHDWDNTGGSSSDGFTNSSYEEARLHNMIPEDGKRDLYATAHIGHPNMEANEKNLNPIRWKQKPLVEQQQNQSISDLAMNHENRKTLDEHIIEFVEPQILNHTKNDPTREKDVLRTVNHPLGKPFTNSYSSNSNYRTDREAQVLFKKRVTIHFLSKHRPSLQDQHGKLIILPDSLEDLLKIAGEKFGGSKPTKVINTENAEIDDISVIRDGDHLFFLSSDSENLSS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0776 744 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Apr5g0776 744 SUPERFAMILY cAMP-binding domain-like 304 493 IPR018490 -
Apr5g0776 744 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr5g0776 744 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr5g0776 744 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr5g0776 744 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr5g0776 744 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr5g0776 744 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr5g0776 744 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Apr5g0776 744 CDD CAP_ED 377 490 IPR000595 -
Apr5g0776 744 Gene3D - 60 300 - -
Apr5g0776 744 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr5g0776 744 Gene3D Helix hairpin bin 301 367 - -
Apr5g0776 744 Pfam KHA, dimerisation domain of potassium ion channel 665 734 IPR021789 -
Apr5g0776 744 PANTHER POTASSIUM CHANNEL AKT1 544 744 IPR045319 GO:0005249|GO:0006813
Apr5g0776 744 PANTHER POTASSIUM CHANNEL AKT1 1 544 IPR045319 GO:0005249|GO:0006813
Apr5g0776 744 Gene3D Jelly Rolls 369 501 IPR014710 -
Apr5g0776 744 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Apr5g0776 744 SMART cnmp_10 377 494 IPR000595 -
Apr5g0776 744 ProSiteProfiles KHA domain profile. 666 744 IPR021789 -
Apr5g0776 744 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 544 - -
Apr5g0776 744 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 544 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0776 Apr-Chr5 11051276 11057266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0776 1 737 Ion Channels AT5G46240 60.647 0.0 904