Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0773 ATGGCATCAAAGCCGGTCAAAATGCCTCATTTGCCTAATTCAAATTATTTATTATATTGGTGGGAATTGATCGAAACTTTTGCTGAAAAGCAGATAGAAGAAGCTCTCGAGACGGATCAAGCTTGTACAAATTCAGAAAGTTACGTCAGAAAGGTGAATCAAGAAACAAAAGATGCCTCCATAACTGACAATAATGCAACCAGTGGAGTTGTACAAATTGACCAAGTTTCAAAACATAATGCAAAGATGCCAACAAGTAAACCAGCATCTAAACCTGACAATTTAGAGAAGTCCTTTAGGAACACTTCTGATTTTGCCACTACTCAACTCCCAGGTCCAAATCCAAGAGTGCCTTCAAATTCTGACCTTTCAACCACCTCATCAGGAGTAACAACAGGAACCACAAGGGGGTTTCCTATGCCAACCAAAAACACCAATCAAGGCCAAGTGAGTGGCACTAGCTCCCGTAGTGATAGTTTAGAGAGCAGTTGTAGTGCACCTATTAAGCCACACACTGGAGGTGATGTAAGGTGGGATGCAATTAACATGGTTTCAAAGGGCAATGGTCTTAATCTTAGCCATTTTAGGCTTCTAAAGCGTGTTGGTTATGGAGACATTGGAAGTGTATATCTTGTGGAACTTAAAGGAAGTAAGGCCTTCTTTGCCATGAAAGTAATGGATAAGGCCTCACTTGCAAGTAGAAACAAGCTTCTGAGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGACCACCCATTTTTGCCAACTTTGTATTCTTACTTTGAAACTGAAAAGTACTACTGTTTGATCATCGAGTTCTGCAGCAGTGGTAGTCTTCATTCTCTAAGATTGAAGCAACCTAAGAGGCATTTCACTGAAGAAGCCGCACGGTTTTATTGTTCAGAGATTTTGTTAGCTTTGGAATACCTTCACATGCTAGGCATTGTGTACAGAGACTTAAAGCCAGAGAATGTTCTAGTCCGAGATGAAGGTCACATAATGCTATCAGATTTTGATCTTTCACTTCGGTGCTCTGTGAGTCCTACACTGGTGAAGTCATCATCAGCACGTGTAAGTAGCAGTGGTCTTTCTGGGGGCATTTTGGATGATGATCAAGCAGTGCATGGTTGCATACAGCCCTCAAGTTTCTTCCCACGCATTTTGCCTTCAAAAAAGAATCGCAAGTCAAAGTCAGATTTTGGCCTAATGGTTGGAGGGCGCCTCCCTGAACTAATGGCAGAGCCTACAAATGTGAGGTCAATGTCCTTTGTAGGGACACACGAGTATCTTGCACCAGAGATTATTCGCGGCGAGGGACATGGTAGTGCAGTGGATTGGTGGACATTTGGAATCTTCTTGTATGAGCTCTTGCATGGAACGACACCCTTCAAGGGTGCAGGAAACAAAGCCACATTGTTTAATGTTGTAGGACAGCCTTTAAGGTTTCCAGAAACACCCCGTGTTAGTAGTGTTGCAAGAGACCTTATAAGAGGGTTGTTGGTGAAAGAGCCTCAGAAAAGGTTTGCTTACAAAAGGGGTGCCACAGAAATTAAACAACACCCCTTTTTTGAGGGAGTGAATTGGGCTCTAGTTAGAAGTGCCACACCTCCTATTATACCTGAACCTCCAGATTTTTCCAAGTATGCTAGCAAGGAAAATGTGGCCCCAATAGACAAGAAGATTGCAGATATTGTTGCAAGTGATAAAAGTAGCCATAAACAACCTGATTCTTCTTATGAAGATTTTGAGTACTTTTAG 1761 0.4214 MASKPVKMPHLPNSNYLLYWWELIETFAEKQIEEALETDQACTNSESYVRKVNQETKDASITDNNATSGVVQIDQVSKHNAKMPTSKPASKPDNLEKSFRNTSDFATTQLPGPNPRVPSNSDLSTTSSGVTTGTTRGFPMPTKNTNQGQVSGTSSRSDSLESSCSAPIKPHTGGDVRWDAINMVSKGNGLNLSHFRLLKRVGYGDIGSVYLVELKGSKAFFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETEKYYCLIIEFCSSGSLHSLRLKQPKRHFTEEAARFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSARVSSSGLSGGILDDDQAVHGCIQPSSFFPRILPSKKNRKSKSDFGLMVGGRLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNKATLFNVVGQPLRFPETPRVSSVARDLIRGLLVKEPQKRFAYKRGATEIKQHPFFEGVNWALVRSATPPIIPEPPDFSKYASKENVAPIDKKIADIVASDKSSHKQPDSSYEDFEYF* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0773 586 MobiDBLite consensus disorder prediction 99 166 - -
Apr5g0773 586 Gene3D Transferase(Phosphotransferase) domain 1 400 542 - -
Apr5g0773 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Apr5g0773 586 CDD STKc_phototropin_like 193 545 - -
Apr5g0773 586 ProSiteProfiles Protein kinase domain profile. 195 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0773 586 SUPERFAMILY Protein kinase-like (PK-like) 192 550 IPR011009 -
Apr5g0773 586 Gene3D Transferase(Phosphotransferase) domain 1 279 348 - -
Apr5g0773 586 ProSiteProfiles AGC-kinase C-terminal domain profile. 525 586 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr5g0773 586 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 52 586 - -
Apr5g0773 586 MobiDBLite consensus disorder prediction 567 586 - -
Apr5g0773 586 Gene3D Phosphorylase Kinase; domain 1 193 278 - -
Apr5g0773 586 PANTHER FLIPPASE KINASE 1-RELATED 52 586 - -
Apr5g0773 586 Pfam Protein kinase domain 417 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0773 586 Pfam Protein kinase domain 196 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0773 586 MobiDBLite consensus disorder prediction 75 168 - -
Apr5g0773 586 SMART serkin_6 195 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0773 Apr-Chr5 10977093 10979897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0773 70 586 AGC Kinase Gene Family AT1G79250 65.922 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr5g0773 Pkinase 2e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0708 2 8933262 8935875 Apr5g0773 5 10977093 10979897 PCT