Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0771 ATGAAGTACGTGTTGGTGACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGTGTCACTGCCAGCAGCATTGGGGTGCTCCTTAAGGCCTGTGGCTTTCGGGTTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTTTTAGATGATGGCGGTGAGGTTGACCTGGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTAACTCGTGACAATAATATCACAACTGGAAAAATATATCAGTCTGTCATTGAAAAGGAGAGAAGAGGAGACTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATTACTGATGCCATCCAAGAATGGATAGAGCGTGTATCACTGACACCGGTTGATGGAAAAGAAGGCCCCGCTGATGTTTGTGTCATTGAGTTGGGTGGAACTATAGGAGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGTCAATTTTCATACCGTGTAGGCTGTGGCAACTTCTGTTTAGTTCATGTCAGCCTGGTGCCTGTTCTCAATGTTGTTGGTGAGCAGAAAACAAAACCAACTCAGCATAGTGTCCGTCAACTTAGAGGGTTAGGGTTGACCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGACAACGTCAAGGAAAAACTTTCTCAATTTTGTCATGTGCCGTCATTAAACATACTTACACTGTACGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGAGACCAGAAGGCTCATGAGGCCATCCTGAAAACATTAAACCTGCACAGGTTTCCTAATTTTAAAGAGTGGATTGCAAGAACAAAAGTTTATGACAAATTTAATGAATCTGTTAGAATTGCGATGGTGGGAAAATATACTAACCTTTCAGATGCATATCTTTCTGTGCTGAAGGCACTTTTGCATGCTTCTGTTGCTTGCTACAGAAAGCTTGTTGTGGACTGGGTTCGTGCTGAGGATCTTGAAGATGATACATCTAAAGAGGATCCTGATGCCTATAAAGCTGCTTGGGGTCTTTTGAAGGGTGCTAGTGGGATTCTAGTTCCAGGAGGTTTTGGTGACAGAGGAGTGCAAGGGAAAATTCTTGCCGCTAAGTATGCTCGAGAAAACAGTGTTCCATTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTGCAAGATCTGTTCTAGGTCTTCATGATGCTAATAGCACAGAATTTGATCCCAATACTAAAAATCCTTGTGTCATATTTATGCCAGAAGGTTCGAAGACTCACATGGGTGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTCCAAGATTTCAACTGTAAATCGGCAAAGTTGTATGGTAGTGCAAGCTACATTGATGAGCGACATCGGCATAGATATGAGGTTAATCCTGACATGATATCACAACTTGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGAGAAACGCATGGAGATAGTTGAATTGCCTGGCCATCCTTTCTTCGTTGGTGCTCAATTTCATCCCGAGTTCAAGTCAAGACCAGGGAAACCTTCTCCATTATTCTTAGGATTAATAGCAGCAGCATGTGAGAGGACACTTGTGCCTGCAAGTAAAGCGTATGCCAAGTTAACAAATGGGATAATTAATGCACACCCTTCAATGTTGAAGGCACATAATAATGGAAATGGGTTCAAATCTTCCAATAGTTCCTTAAACGGTGTATATACAAATGCGAATGGCCTATGTGTTGATGGGAGCTATTAA 1809 0.4218 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVSLTPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGCGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKEKLSQFCHVPSLNILTLYDVPNIWHIPLLLRDQKAHEAILKTLNLHRFPNFKEWIARTKVYDKFNESVRIAMVGKYTNLSDAYLSVLKALLHASVACYRKLVVDWVRAEDLEDDTSKEDPDAYKAAWGLLKGASGILVPGGFGDRGVQGKILAAKYARENSVPFLGICLGMQIAVIEFARSVLGLHDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQDFNCKSAKLYGSASYIDERHRHRYEVNPDMISQLESAGLSFVGKDETEKRMEIVELPGHPFFVGAQFHPEFKSRPGKPSPLFLGLIAAACERTLVPASKAYAKLTNGIINAHPSMLKAHNNGNGFKSSNSSLNGVYTNANGLCVDGSY* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0771 602 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Apr5g0771 602 Gene3D - 1 289 IPR027417 -
Apr5g0771 602 Pfam Glutamine amidotransferase class-I 306 541 IPR017926 -
Apr5g0771 602 Hamap CTP synthase [pyrG]. 1 547 IPR004468 GO:0003883|GO:0006221
Apr5g0771 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Apr5g0771 602 PANTHER CTP SYNTHASE 1 569 IPR004468 GO:0003883|GO:0006221
Apr5g0771 602 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 296 549 - -
Apr5g0771 602 Gene3D - 291 554 IPR029062 -
Apr5g0771 602 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Apr5g0771 602 PANTHER CTP SYNTHASE 1 569 - -
Apr5g0771 602 SUPERFAMILY Class I glutamine amidotransferase-like 294 546 IPR029062 -
Apr5g0771 602 CDD GATase1_CTP_Synthase 295 540 IPR033828 GO:0003883|GO:0006241
Apr5g0771 602 TIGRFAM PyrG: CTP synthase 1 542 IPR004468 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0771 Apr-Chr5 10939844 10947792 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0771 5 10939844 10947792 Apr5g0771 5 10939844 10947792 ECH
Apr2g0757 2 10162660 10167794 Apr5g0771 5 10939844 10947792 PCT
Apr5g0771 5 10939844 10947792 Apr2g0703 2 8844215 8851301 PCT