Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0739 ATGTCCTCTTCCTCACATGAAATCATTCTCACCAGCTCCCCTCATGGCCCCATCACGGCCTATGAGCCCTCCAGCGGCGCCACCGTCGCCCGATTCTCCGGCAGCCGGTCGCCTTGCCGCGGCCTCGCCATGGCAGGCCAAGGCCTAATTGCTGCCTCTCATGTGTCCTCAGACACAGGTGCAGGCTCAATTAACATCTATAATTGGTATACTTCGACTGTGTTCCATAACTTCCCTGTCCCTGAACCTGTTGCTCCACTCATTGCTACCCCTGGAGGAGAATTTCTTTTTGCTGGTGGCATATCAGGGAGTGTTCATTCTCTTTCAATTTCTTCTGGGGATGTGATCAAATCATTTGTTGTACACCCAAGAGCAATTTCCAGTCTTCATCTTAGTGATGATGGGTCGCTAGTTATTTCAGGTAGTGATGATGGAACCGTTGCTTTGATCCCAACTTTTAAGCTTGTTGTTGAGGCCTCTTGTTCAGATGCAAAAGATTTGATTTTGCACAAATGGAAGGCACATTCTGATTCAGTGACTGCTTTCAACAACTCTGGACTAGGTACATTGGTTTCTTGTTCACTAGATTGCACATGTAAGTTTTGGAATCTGGCAAATAATGGGGTTCTCATGTGCACTGTGGCATTCCCTTGTGCCATTTTTGGGGTTGCATTGAATTCAACTGAGTCATGGTTCTATGCTGCTGGTGCAGATGGGTTGGTTTATAAGGGATTAATGAAGGTTGGGAGCAGAAAATTACTTGGTAGAGCCTATGAGTTGAAAAATTGGCCTAGGAGCCATAATGGGTCAATTGTGTCTTTGGTTTCTGTGAATGGAGGGAGGAATTTGGTGTCTGCTGCAGAAGATGGGAGTGCTTGGATGTGGGATGTTGAGAGGGGAGAAGTCACAATGGTTTTGGGGAATGGCATGGAAAACATCAGTGATATGATTGTAGCTAGAGGCAGTGGTGAGTTTGGAGTTAGAAAGGGAAATAATGCTACAATTGGTCAAGCTAATGGGTTCTTCACTTCTTATGAGCTGTGTGATGAAGAGATGATTAAGACTATGAAGCAAATCACAGAGCTTGGAGAGGTCATGGATGTGGTGGTACATGACAAGAAAAGAGCCATTGACATGTTGGAATCTGCAATTGAAATGTATGAGAGACTCTTGAAGCTTATCCTTAAAGAAGTTACCAAAGCCACTGAAGAGGCAGAGAAGGAAGAAGACAAAGAGGAAGAGGAAGAAGGAAAAGAGGATGAGACAGAGGAAGACAAGTAA 1281 0.4512 MSSSSHEIILTSSPHGPITAYEPSSGATVARFSGSRSPCRGLAMAGQGLIAASHVSSDTGAGSINIYNWYTSTVFHNFPVPEPVAPLIATPGGEFLFAGGISGSVHSLSISSGDVIKSFVVHPRAISSLHLSDDGSLVISGSDDGTVALIPTFKLVVEASCSDAKDLILHKWKAHSDSVTAFNNSGLGTLVSCSLDCTCKFWNLANNGVLMCTVAFPCAIFGVALNSTESWFYAAGADGLVYKGLMKVGSRKLLGRAYELKNWPRSHNGSIVSLVSVNGGRNLVSAAEDGSAWMWDVERGEVTMVLGNGMENISDMIVARGSGEFGVRKGNNATIGQANGFFTSYELCDEEMIKTMKQITELGEVMDVVVHDKKRAIDMLESAIEMYERLLKLILKEVTKATEEAEKEEDKEEEEEGKEDETEEDK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0739 426 MobiDBLite consensus disorder prediction 407 426 - -
Apr5g0739 426 MobiDBLite consensus disorder prediction 401 426 - -
Apr5g0739 426 PANTHER WD-REPEAT PROTEIN 18 1 409 IPR045227 -
Apr5g0739 426 Gene3D - 1 155 IPR015943 GO:0005515
Apr5g0739 426 PANTHER OS09G0477800 PROTEIN 1 409 - -
Apr5g0739 426 Pfam WD domain, G-beta repeat 115 147 IPR001680 GO:0005515
Apr5g0739 426 Pfam WD domain, G-beta repeat 169 203 IPR001680 GO:0005515
Apr5g0739 426 ProSitePatterns Trp-Asp (WD) repeats signature. 283 297 IPR019775 -
Apr5g0739 426 SMART WD40_4 25 68 IPR001680 GO:0005515
Apr5g0739 426 SMART WD40_4 207 243 IPR001680 GO:0005515
Apr5g0739 426 SMART WD40_4 112 151 IPR001680 GO:0005515
Apr5g0739 426 SMART WD40_4 165 203 IPR001680 GO:0005515
Apr5g0739 426 SMART WD40_4 257 296 IPR001680 GO:0005515
Apr5g0739 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 119 149 IPR001680 GO:0005515
Apr5g0739 426 Coils Coil 370 425 - -
Apr5g0739 426 ProSiteProfiles Trp-Asp (WD) repeats profile. 264 305 IPR001680 GO:0005515
Apr5g0739 426 Gene3D - 156 323 IPR015943 GO:0005515
Apr5g0739 426 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 5 301 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0739 Apr-Chr5 10250106 10251386 Dispersed