Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0738 ATGGCGCTGCTGTGTGGCTCATCTTCGGTGACGTGTTCTCCATCTTCGTTCCTTTCTCACAAGAATGTCAAAACTGCAACAAAATCTTCCTTTGTTGGCTTCCAATTGCCTCTACCTAAGCTTTCGTTATCTTCTTCTATTAAGACCCTTTTACCTGCAACCGCAACTCCTGTTGTCCGATGTCAACAGGAGTCTTCTTCTCCTGTCGTAGAAGATCCTCGCTTCATTTGCGTTGAACCTGAACCCCGTTTCAAAGGACCGGATATTTGGAACAAGACCTGGTATCCAAAAGCTGCAGATCATGTGAATACAGAGAAAACATGGTATGTTGTTGATGCAACAGACAAAGTTCTTGGAAGACTAGCTTCTACAATTGCTATTCACATCCGAGGGAAAAACTTAGCGACGTACACACCTAGTGTGGACATGGGTGCATTTGTAATTGTGGTAAATGCAGAGAAGGTTGCTGTATCTGGGAAAAAGAGGACCCAAAAGCTTTACAGGAGGCACTCTGGACGACCTGGTGGCATGAAGGTGGAGACATTTTCCCAGCTGCAAAACAGAATTCCTGAAAGAATTATTGAACATGCTGTTCGTGGCATGCTTCCAAAAGGGAGGCTTGGCAGGAGACTATTCACTCACCTGAAGGTTTATAAGGGCCAAGATCATCCACATGCAGCACAGAAACCCGTTGAGTTGCCAATAAGGGATAAGAGAATACATTTGCAGAAATAG 735 0.4463 MALLCGSSSVTCSPSSFLSHKNVKTATKSSFVGFQLPLPKLSLSSSIKTLLPATATPVVRCQQESSSPVVEDPRFICVEPEPRFKGPDIWNKTWYPKAADHVNTEKTWYVVDATDKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFSQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGQDHPHAAQKPVELPIRDKRIHLQK* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0738 244 Hamap 50S ribosomal protein L13 [rplM]. 108 234 IPR005822 GO:0003735|GO:0005840|GO:0006412
Apr5g0738 244 Pfam Ribosomal protein L13 106 224 IPR005822 GO:0003735|GO:0005840|GO:0006412
Apr5g0738 244 PANTHER RIBOSOMAL PROTEIN L13 60 243 IPR005822 GO:0003735|GO:0005840|GO:0006412
Apr5g0738 244 PANTHER 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC-LIKE 60 243 - -
Apr5g0738 244 ProSitePatterns Ribosomal protein L13 signature. 198 220 IPR023563 GO:0003735|GO:0005840|GO:0006412
Apr5g0738 244 Gene3D Ribosomal protein L13 97 240 IPR036899 GO:0003735|GO:0005840|GO:0006412
Apr5g0738 244 TIGRFAM rplM_bact: ribosomal protein uL13 102 233 IPR005823 GO:0003735|GO:0005840|GO:0006412
Apr5g0738 244 SUPERFAMILY Ribosomal protein L13 102 236 IPR036899 GO:0003735|GO:0005840|GO:0006412
Apr5g0738 244 CDD Ribosomal_L13 108 220 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0738 110 243 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.206 2.57e-06 45.1