Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0735 ATGTGTAATACTTTCTCTCCATTTCCCCTTTTATTTTTCCTCCCTCTTTGCTTTGCTTCATTTGGATTTGGAGCTACTTTGCCAGAAGATGAAGTGCAAGGTCTGAGAGACATAGCTGTAACAATTGGGAAAAAGAATTGGGACTTCAACGTAGATCCATGTAGTGGAAAGAGTAACTGGAAATCGGCTATTCAATTGCAAGGTTCAGAAAATTCCGTGACTTGTAATTGTTCTTTTGCAAATCACACGGTTTGTCATGTTGTCAGCATTGTTTTAAAAGCACAAAATCTTTCGGGTAGCGTCCCAACGGAGCTTGGCCGGTTGCCTTTTCTCCAAGAAATTGACCTCACCCTCAACTACCTTAATGGTACAATTCCTAAACAATTGGCCACCTTAAATATTGTCAACATTTCCTTTTATGGAAACCGTTTAACGGGTCCTATCCCAAAGGAGCTTGGAAACATCACCACTCTCAAAAGTTTGGTATTGGAGTTCAATCAATTATCTGGAAATCTTCCTCCAGAGCTTGGGAATCTTATCCAGATTGAAAGACTGCTTCTAACCTCCAACAATTTCACTGGAGAGTTACCTGCAACATTTGCTAGGCTCACAACATTGAAGCATGTTCGAATTGGTGGTAATCAATTCTCAGGAGCAATACCCAATTTTATACAGAGCTGGATAAATCTTGAGATACTCGTGATGCAAGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGGAATTTCACTTTTGAAGAACCTTACTGACTTGAGAATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTGATAACATGACAAATTTGAAAACACTAATGTTGAGGAGTTGCAATATTATTGGAGCCTTGCCTGAATCTCTTGGAAAACTGACTACTTTGCAAGTATTAGATCTTAGCTACAACAAATTAACTGGACCAATTCCGAGCAGTTTTGATGGTCTACAAAACATGAATATGCTATTTTTAGGTGGGAATAGTCTCACAGGATCACTACCTCAGTGGATAGATAAACCAGACTTTGTTGATCTCTCATATAACAACTTCAGCATCAGAGGCATAGAGCAGCAGACTTGTCAACAGGGAAGCGTGAACTTGTTTGCTTCATCTTTGAATGGAAACAGCTTAGGAAATGTTTCATGTTTGTCAAACATTCCGTGTCCTAAAACTTCGTATTCTCTCCATATAAATTGTGGTGGAAAAGTTGTAACTTCTGATGGAAACCAGACATATGAAGATGACTCCAATGCGACTGGACCTGCAAGATTTATTTACCCTGGAACAAACTGGGCACTTATCAACACTGGTCATTTCTTTGATAGCAGTCACTCAGATTACTATACATGGTCTAATACAACTAAGCTTGCAGTGGACAATGCTGAACTGTACATGAACGCACGTGTTTCTCCCAATTCTTTGACTTATTATGGATTTTGCCTGGGAAATGGAAACTACACAGTGAATCTCCACTTTGCTGAAATAATGTTTACTGATGATAAAACATATAGCAGCCTTGGAAGGCGTGTATTTGATATCTACATTCAGAGGAAGTTGGTAGTTAAGGATTTCAATATTGCAAAAGAAGCAGGGGGTGTTGCTAAGGCAGTCATAAAAAATTTCACAGCTGTTGTGACTAATAATGCCTTGGAGATCCGATTATATTGGGCTGGGAAAGGAACCACTTCTATTCCATTTGGATCAGTATACGGTCCTCTTATATCAGCAATATCTGTTGATTCTGACTTTACACCCCCATCAGAAAATGGTAGAAGCATATCTGTAGGGGTTGTGGTTGCAATTGTGGTTGTTGGAGCAATTGTTATCATCTTTGTATTTGGCATATTATGGTGGAAGGGTATTATACATCTGAAAAGATCAGCCAGAGAGTTAAAGGATTTCAATTCACCAACTAGTTTATTCACCCTGCGACAAATCAAAGCAGCGACAAATAACTTTGACAAATCCTTCAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTGTTTTATCAGATGGCACAATAGTAGCAATTAAGCAACTTTCTACTAAATCAAGGCAAGGGAATCGTGAATTTATAAATGAGATAGGCCTGATTTCTGCTTTGCAACACCCTTCTCTAGTGAAGCTCTTTGGATGTTGTATGGAGGAGGATCAATTGTTGCTGATATATGAATACATGGAAAACAACAGTCTTGCTCGTGCTTTATTTGTCAAAAGTGATGACCCTGAAAATTCTCCGTTGAGATTGGATTGGAAAACAAGGCAGAGGATTTGTGTTGGTATTGCTAAAGGCTTGGCTTACCTTCATGAAGAGTCAAGACTGAAGATTGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTGGATAAAGATCTCAACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTAATGAAGGGGACAAAACCCACATGAGCACTAGAATAGCTGGCACTTATGGGTACATGGCACCGGAGTATGCAATGCTTGGTTATTTGACGGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGTATTGGAAATTGTTAGTGGGAAGAGCAACACCATTAGCCAGCCTATGGAAGAGTGCTTCTCTCTTCTTGATTGGGTGGATGTGCTGAAAGAAAGAGGGAACCTAATGGAGCTTGTGGATAAGAGGTTGGGTGAAGACTTCAACAAAGATGAGGCATTGGTGATGATCAATGTAGCTCTTTTATGCACCAAAGTCTCTCCAACTCTCAGGCCCACCATGTCTTCAGTGGTAAGCATGCTTGAAGGTAGAACCGTTGTTCAAGTGGTGTCAGACACAAAAGAGGTAATGGATGATAGGAAATTTGAGATGATGCAACAATATTTCCAACACAGAGGACAAAATCACATAATTGAGAGTCAGAGCCAGAGTGTCCCAACAGATGAAACTTCTGGACTTCTATCTGATACGGGTTCTTCAAGGGGGGAGATCAAAAGTTAG 3003 0.4003 MCNTFSPFPLLFFLPLCFASFGFGATLPEDEVQGLRDIAVTIGKKNWDFNVDPCSGKSNWKSAIQLQGSENSVTCNCSFANHTVCHVVSIVLKAQNLSGSVPTELGRLPFLQEIDLTLNYLNGTIPKQLATLNIVNISFYGNRLTGPIPKELGNITTLKSLVLEFNQLSGNLPPELGNLIQIERLLLTSNNFTGELPATFARLTTLKHVRIGGNQFSGAIPNFIQSWINLEILVMQGSGLSGPIPSGISLLKNLTDLRITDLNGSDSPFPQLDNMTNLKTLMLRSCNIIGALPESLGKLTTLQVLDLSYNKLTGPIPSSFDGLQNMNMLFLGGNSLTGSLPQWIDKPDFVDLSYNNFSIRGIEQQTCQQGSVNLFASSLNGNSLGNVSCLSNIPCPKTSYSLHINCGGKVVTSDGNQTYEDDSNATGPARFIYPGTNWALINTGHFFDSSHSDYYTWSNTTKLAVDNAELYMNARVSPNSLTYYGFCLGNGNYTVNLHFAEIMFTDDKTYSSLGRRVFDIYIQRKLVVKDFNIAKEAGGVAKAVIKNFTAVVTNNALEIRLYWAGKGTTSIPFGSVYGPLISAISVDSDFTPPSENGRSISVGVVVAIVVVGAIVIIFVFGILWWKGIIHLKRSARELKDFNSPTSLFTLRQIKAATNNFDKSFKIGEGGFGPVYKGVLSDGTIVAIKQLSTKSRQGNREFINEIGLISALQHPSLVKLFGCCMEEDQLLLIYEYMENNSLARALFVKSDDPENSPLRLDWKTRQRICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNEGDKTHMSTRIAGTYGYMAPEYAMLGYLTDKADVYSFGIVVLEIVSGKSNTISQPMEECFSLLDWVDVLKERGNLMELVDKRLGEDFNKDEALVMINVALLCTKVSPTLRPTMSSVVSMLEGRTVVQVVSDTKEVMDDRKFEMMQQYFQHRGQNHIIESQSQSVPTDETSGLLSDTGSSRGEIKS* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0735 1000 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 290 345 - -
Apr5g0735 1000 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 74 289 - -
Apr5g0735 1000 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 379 978 - -
Apr5g0735 1000 Pfam Leucine rich repeat 276 336 IPR001611 GO:0005515
Apr5g0735 1000 SUPERFAMILY Protein kinase-like (PK-like) 641 936 IPR011009 -
Apr5g0735 1000 ProSiteProfiles Protein kinase domain profile. 660 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0735 1000 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 290 345 - -
Apr5g0735 1000 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 74 289 - -
Apr5g0735 1000 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 379 978 - -
Apr5g0735 1000 MobiDBLite consensus disorder prediction 974 1000 - -
Apr5g0735 1000 CDD STKc_IRAK 666 937 - -
Apr5g0735 1000 Gene3D - 402 589 - -
Apr5g0735 1000 Gene3D Phosphorylase Kinase; domain 1 627 735 - -
Apr5g0735 1000 Gene3D Ribonuclease Inhibitor 43 200 IPR032675 -
Apr5g0735 1000 SUPERFAMILY L domain-like 81 357 - -
Apr5g0735 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Apr5g0735 1000 Gene3D Transferase(Phosphotransferase) domain 1 736 959 - -
Apr5g0735 1000 Pfam Malectin domain 401 584 IPR021720 -
Apr5g0735 1000 SMART serkin_6 660 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0735 1000 Gene3D Ribonuclease Inhibitor 201 401 IPR032675 -
Apr5g0735 1000 Pfam Protein kinase domain 662 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0735 Apr-Chr5 10168890 10189870 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0735 21 968 Receptor kinase-like Gene Family AT1G53420 55.047 0.0 1000
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0735 Pkinase 5.9e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0735 5 10168890 10189870 Apr2g0488 2 5669082 5678215 PCT