Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0734 ATGTGCTACAATAATACCAAAGTTATGGCGCACTTATTGTTGCTAGCAACAATGATAGTGGGCAGTGCAATGGGAGATTCATCCAAGGACATAGAGGAATGCACGGAGCAATTGGCAGGGCTAGCAACATGCTTGCCTTATGTTGGGGGTCAAGCAAAATCTCCAACAGCAGATTGTTGTAGCGGTCTTAAGCAAGTGCTCAAGAACAACAACAAGTGTTTGTGTGTAATTATCAAAGATCGTAATGATCCTGATCTGGGTGGTTTGCAGATTAATGTGACCTTAGCTTTGAGCCTCCCAACAGTTTGCAATGCCCCTGCTAACATCTCCAAGTGCCCCGAGCTGCTGCACATGGATCCCAAATCACCAGAGGCTCAAGTATTTTATCAATTGGAGAAAGGTTCCAACAAAAGTAGCACAAGTCCTGCATCCAGTCCTTCTGATGCAGTTGGATCAAATCCTGCAAGCAGTAAACAAACAGCCAGTGCCCCGCAGAAGAATGATGCATTCTGCAAGGAGAAAAGATTGTTTGGGTCAAATGTTTTAGCTGCATGGCTTCTAGTTTGGCTTTTATTGGACTCTTCTGCTATAAACATGTTCCAGCTCCTTCCCTATCTCTGTGTCAACTCACTGTAA 636 0.4434 MCYNNTKVMAHLLLLATMIVGSAMGDSSKDIEECTEQLAGLATCLPYVGGQAKSPTADCCSGLKQVLKNNNKCLCVIIKDRNDPDLGGLQINVTLALSLPTVCNAPANISKCPELLHMDPKSPEAQVFYQLEKGSNKSSTSPASSPSDAVGSNPASSKQTASAPQKNDAFCKEKRLFGSNVLAAWLLVWLLLDSSAINMFQLLPYLCVNSL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0734 211 SMART aai_6 34 112 IPR016140 -
Apr5g0734 211 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 192 IPR043325 -
Apr5g0734 211 MobiDBLite consensus disorder prediction 135 165 - -
Apr5g0734 211 Gene3D - 30 112 IPR036312 -
Apr5g0734 211 Pfam Probable lipid transfer 18 112 IPR016140 -
Apr5g0734 211 PANTHER PROTEIN YLS3-LIKE ISOFORM X1 18 192 - -
Apr5g0734 211 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
Apr5g0734 211 CDD AAI_LTSS 41 104 - -
Apr5g0734 211 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Apr5g0734 211 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Apr5g0734 211 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0734 Apr-Chr5 10143433 10144789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0734 7 192 Acyl Lipid Metabolism Gene Families AT2G44290 52.792 7.27e-65 197