Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0730 ATGGGCGTCGTAATAATCGATGGAACCACGGTGCGTGACTTCGTAAGCAACGAGGAGTCGTTCACGAAGAGCGTCGACGAGCAGTTCGCGGCTTTGGATCTCAACAACGACGGCGTTTTGTCGCGTTCAGAGCTACGAACTGCGTTCGAGTCGATGCGCCTCATCGAGGCTCACTTCGGCATCGACGTGGCAACGCCGCCGGATGAATTGAAGAGCTTGTACGACTCCATCTTCGACAAGTTTGACGGCGACAACAGCGGCGCCGTTGACCGCAACGAGTTCCGATCGGAGATGAAGAAGATCATGCTGGCTATCGCAGATGGGTTGGGCTCCTTCCCCATTCAGATGGTCCTCGAAGACGATCCCAATAGCCTCCTCCAGAAAGCTGCAGATCTAGAAGCTTCCAAGACCGCCGCCACCTGA 423 0.5579 MGVVIIDGTTVRDFVSNEESFTKSVDEQFAALDLNNDGVLSRSELRTAFESMRLIEAHFGIDVATPPDELKSLYDSIFDKFDGDNSGAVDRNEFRSEMKKIMLAIADGLGSFPIQMVLEDDPNSLLQKAADLEASKTAAT* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0730 140 SMART efh_1 73 101 IPR002048 GO:0005509
Apr5g0730 140 SMART efh_1 24 52 IPR002048 GO:0005509
Apr5g0730 140 Pfam EF-hand domain pair 27 98 IPR002048 GO:0005509
Apr5g0730 140 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Apr5g0730 140 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 138 - -
Apr5g0730 140 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Apr5g0730 140 SUPERFAMILY EF-hand 21 104 IPR011992 -
Apr5g0730 140 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Apr5g0730 140 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN 1 138 - -
Apr5g0730 140 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Apr5g0730 140 Gene3D - 9 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0730 Apr-Chr5 10104260 10131324 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0730 1 136 EF-hand Containing Proteins AT2G44310 76.471 2.21e-72 211