Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0726 ATGTGGTTTGTTCTGTCAGGGTCCAAACTAGGACATGTTCTTTTCTTTGGTTTTCTGGCTTTGAAATGCTTCGAAGATTTTGGGTCCAATGCTCAACTCATACCACAAGATGAAGTGAAAGTTCTACAAGCAATATCGGATAAACTAAAGAACTTGAACTGGAAAGTCACAGAGCGTTCCTGCACAGAGGATGGAAGCTTTAATGGCCAGGTTTATGTAGATGATGATATTGTCAGGAATGTCACATGCAATTGCACCTTCCAAAGAAACACTGTTTGCCATGTTGATAACATCACTCTCAAAGGTCAAAATATATCCGGAGTTATACCCAGTGAATTTGGAAATCTTACTCAACTAAAAGTACTTGATCTCTCTCGCAACTTTCTCAATGGCTCACTGCCAACGAATTTTGGTCGCAACTCGCTGGTTATTCTGTCCCTTGTGGGAAACCGACTAAGTGGCCCAATTCCCGTAGAAATTGGTGACATAGCTAGTCTGGAGGAACTGGTCTTAGAAAGTAATCAACTCGAAGGATCACTTCCGCCCAATCTTGGAAATTTGAGCAAGTTGAGGAGACTGCTTCTTTCTGCAAATAATTTTACTGGGACCATACCAGAAACATTTGGCAAACTAAAGAATCTCACTGATTTTAGGATAGATGGAAACAGTTTAACCGGATCAATACCCAGTTTTATTGGGAACTGGACCAAACTTGACAGATTGGATATGCGGGGAACATCTATGGAAGGCCCGATTCCTCCCACTATATCACAGTTGAAACTTTTGACTGAATTGAGAATCACTGATTTGAATGGACCAACAACTATGGCATTTCCTGATCTGATGGATTTGAAAATCTTGGAACGATTGGAATTGAGAAATTGCTTAATCACTGGTCTTATTCCGGATTACATTGGTGAAATGTCTAAGTTAAAAACTTTAGACCTAAGCTTCAATATGTTGACTGGTCCAATCCCAAATTCAATTCAGGGATTGAAAAGCCTAAATTATATGTTTCTGACTAATAATTCTCTGAGCGGACCAATTCAAGACTGGATACTGAACTTCAAAATTAATATAGATTTATCTTACAACAATTTTACAAAATCTTCTGCACCTAACTGCCAGATCTTGAATCTGAACTTGGCTTCAAGCCACTCTTCTTCAGCAGTCACTTCGCCTTCAACTTTTTGTTTGAAGAGGAACCTACCTTGTGCTGGAAAACCCCAGTACAAGTCATTGTTCATAAACTGCGGAGGAAATGAGGGAGTGTTTGAAGGCAACAACTATTTTGGTGACCTCCAGCAAGATGGCATTTCAAACTTTCTTCTTAGAAATGAAAAACAATGGGCTTATAGCAGCACGGGAGTATATGTGGGAAATGCTAATGCAGATTATATAGCAGAAAATACATTTTCTTTGAACATTAGTGGTCCAGAATACTACCAAACTGCACGCCTTTCCCCTCTGTCACTAAACTACTATGGCCTTTGTATGCCAAATGGTAATTATAAAGTGAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGAATTTTAGCAGTGTAGGAAGGCGCATATTTGATGTTTCAGTTCAAGGTTATAGATATTTGAAAGATTTTAACATTGTGGAAAAAGCTGGAGCAGTTGGAAAGGGCATCACTGAGGAATTTGATGTTGAAGTTGATGATGGAACCTTGCAAATCCACTTATACTGGGCAGGGAAAGGAACTACTGCCATTCCTGACAGAAGTGTATATGGACCTCTTGTATCTGCAATCGAGATGATACCAAACTTTGAAAATCCTTCAAAAGGCCTGTCTGCTGGAGCTATTGTTGGAATTGTGGCTGCATCATGTGTTCTTGTTATATTGGTATTGGTTGCCCTTTGGAAGATGGGTTTCCTTGGTGGGAAAAATACAACAGATAAAGACCTTCTAGATCTTAAAACAGGTTATTTCAGCTTAAGACAAATTAAAGCAGCCACGAATAACTTTGACTCTGCAAATAAGATAGGTGAAGGGGGATTTGGGCCTGTATATAAGGGTGTGCTGTCAGATGGTGATGTAATTGCTGTTAAGCAGCTCTCCTCCAAATCAAAGCAAGGGAATCGTGAATTTGTCAATGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTGGTGAAGCTTTATGGCTGTTGCATTGAAGGAAACCAGTTGCTGCTAATATATGAATACATGGAGAACAACAGTCTCGCTCGTGCACTTTTTGGTAAAGAAGAACAAAAGCTGCACTTGGACTGGCCCACAAGAATGAAGATCTGTGTGGGGATAGCAAGGGGATTGGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTACATAGGGACATTAAGGCAACCAATGTCTTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTGATGAAGAAGAAAATACCCATATCAGCACCCGGGTAGCTGGAACAATTGGTTATATGGCTCCCGAATACGCTATGCGAGGTTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTCTAGAGATAGTTAGTGGAAAAAGCAACACAAATTACAGGCCAAAGGAGGAGTTTGTATATCTTCTGGATTGGGCCTATGTTCTCCAAGAGCAGGGAAACCTTCTGGAGTTGGTGGATCCAAGTCTTGGTTCAAAGTTCTCCCCAGAAGAGGCCATGAGAATGCTGAGCTTGGCACTCCTATGCACCAATCCATCCCCCACTCTTAGACCACCCATGTCATCTGTAGTTAGCATGCTTGAAGGAAAAACCCCAATCCAAGCACCGATAATCAGGCTCGGTGAAAGCAGCCATGATGCAAGATTTAAAGCCTTTGAGTTCCTATCACAAGACAGCCAAACTTTTGTTTCTTCTGCATACTCACAAGAAAGCATGGAGCAAAGACACAAATCAGCAGATGGGCCATGGGTTGATTCCTCCATATCTCTTCAAAGTAGAGATGATCATTCTTTAATTAATAATGTTTAA 3042 0.404 MWFVLSGSKLGHVLFFGFLALKCFEDFGSNAQLIPQDEVKVLQAISDKLKNLNWKVTERSCTEDGSFNGQVYVDDDIVRNVTCNCTFQRNTVCHVDNITLKGQNISGVIPSEFGNLTQLKVLDLSRNFLNGSLPTNFGRNSLVILSLVGNRLSGPIPVEIGDIASLEELVLESNQLEGSLPPNLGNLSKLRRLLLSANNFTGTIPETFGKLKNLTDFRIDGNSLTGSIPSFIGNWTKLDRLDMRGTSMEGPIPPTISQLKLLTELRITDLNGPTTMAFPDLMDLKILERLELRNCLITGLIPDYIGEMSKLKTLDLSFNMLTGPIPNSIQGLKSLNYMFLTNNSLSGPIQDWILNFKINIDLSYNNFTKSSAPNCQILNLNLASSHSSSAVTSPSTFCLKRNLPCAGKPQYKSLFINCGGNEGVFEGNNYFGDLQQDGISNFLLRNEKQWAYSSTGVYVGNANADYIAENTFSLNISGPEYYQTARLSPLSLNYYGLCMPNGNYKVKLHFAEIMFSDDQNFSSVGRRIFDVSVQGYRYLKDFNIVEKAGAVGKGITEEFDVEVDDGTLQIHLYWAGKGTTAIPDRSVYGPLVSAIEMIPNFENPSKGLSAGAIVGIVAASCVLVILVLVALWKMGFLGGKNTTDKDLLDLKTGYFSLRQIKAATNNFDSANKIGEGGFGPVYKGVLSDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGKEEQKLHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKFSPEEAMRMLSLALLCTNPSPTLRPPMSSVVSMLEGKTPIQAPIIRLGESSHDARFKAFEFLSQDSQTFVSSAYSQESMEQRHKSADGPWVDSSISLQSRDDHSLINNV* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0726 1013 SUPERFAMILY Protein kinase-like (PK-like) 651 939 IPR011009 -
Apr5g0726 1013 Pfam Protein tyrosine and serine/threonine kinase 670 936 IPR001245 GO:0004672|GO:0006468
Apr5g0726 1013 Gene3D Phosphorylase Kinase; domain 1 636 742 - -
Apr5g0726 1013 Gene3D Transferase(Phosphotransferase) domain 1 743 946 - -
Apr5g0726 1013 Pfam Leucine rich repeat 287 345 IPR001611 GO:0005515
Apr5g0726 1013 SMART serkin_6 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0726 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Apr5g0726 1013 ProSiteProfiles Protein kinase domain profile. 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0726 1013 CDD STKc_IRAK 673 940 - -
Apr5g0726 1013 Gene3D Ribonuclease Inhibitor 35 271 IPR032675 -
Apr5g0726 1013 PANTHER - 297 356 - -
Apr5g0726 1013 PANTHER - 73 299 - -
Apr5g0726 1013 PANTHER - 385 999 - -
Apr5g0726 1013 SUPERFAMILY L domain-like 84 379 - -
Apr5g0726 1013 Pfam Malectin domain 413 595 IPR021720 -
Apr5g0726 1013 Gene3D - 413 600 - -
Apr5g0726 1013 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 385 999 - -
Apr5g0726 1013 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 299 - -
Apr5g0726 1013 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 297 356 - -
Apr5g0726 1013 Gene3D Ribonuclease Inhibitor 272 398 IPR032675 -
Apr5g0726 1013 SMART LRR_typ_2 163 186 IPR003591 -
Apr5g0726 1013 SMART LRR_typ_2 187 210 IPR003591 -
Apr5g0726 1013 SMART LRR_typ_2 308 331 IPR003591 -
Apr5g0726 1013 SMART LRR_typ_2 116 140 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0726 Apr-Chr5 9927777 9957689 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0726 23 1005 Receptor kinase-like Gene Family AT1G53440 62.763 0.0 1228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0726 PK_Tyr_Ser-Thr 6.3e-50 CL0016