Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0199 ATGGGTGTAATCGAAGAAATTGGCGCTGATGTTTGTTCAGATATAGAGGTTGATGATATCAGATGTCAAAATATAGCAGAAAAAGATGTCAGTGATGAAGAGATTGAGGCAGAAGAACTGGAGAAGCGGATGTGGAAGGATAGTATCAAACTCAAAAGGATCAAGGAAAGACAGAAACGTCCAGCACAGCAAGCCGCAGAGAAGCAAAAGCCCAGGCCAACAACTGACCAAGCTCGTCGAAAGAAAATGTCCAGAGCACAAGATGGGATTCTTAAGTATATGCTGAAGCTGATGGAAGTCTGCAAAGCTCGTGGATTTGTGTACGGTATAATTCCTGAGAAGGGCAAGCCAGTTAGTGGTTCTTCTGATAACCTTAGAGCTTGGTGGAAAGAGAAGGTGAGGTTTGATAAGAATGGCCCTGCTGCCATAGCTAAGTATGAAGCAGAATGTCTTGCAGTTAGTGAGGCTGAAAATAACCAAAATGGGAATTCTCAGAGCATTCTCCAAGATCTGCAAGATGCAACACTTGGGTCACTCTTATCTGCCTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTAATCCCCCACCTTGGTGGCCAACCGGGACTGAAGATTGGTGGGTACAATTGAATTTACCTTACGGTCAGACTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATTTGGAAAGTTGGAGTGCTAACTGCTGTTATAAAGCACTTGTCACCTGATATTGCAAAAATAAGGAGGCATGTCCGTCAGTCAAAGTGCTTGCAAGACAAGATGACAGCAAAGGAGAGTGGTATTTGGTTGGCAGTATTAAGTAGAGAAGAGGCTCTCATTAGGCAACCTAGTAGTGATAACGGTACCTCTGGAGTAACTGAAACGCTGCGTGGTGTTCCTATTGAAAATAAGCAAGCTAGTGCTAGTAGAGATAGTGATTATGATGTTGATGGTGCTGATGACGGTGTTGGTTCTGTTTCTTCTAAAGAAGATAGGAGAAATCAATTGATGGATACTGAAGCATCAGATAATTTGCACAATGACTCAGTCCAAGATCAAGCTGAGAAGCAACGCAGGAAAAAAAGGCTCCGTCCAAGGTCAAGTGCCACTGACAAACTACCTACTCCATCTCACCATAAAACTTTACATGATGGAACAAGAAGCACTTTGCTCGACACGAATCAGATGGAAGAACAAGTAGTTGGGATCCAGACTCATGCAAATGAACAGGGCAATGTGATAGATTCTACTTTGAGACTTGTAGAAAAAGAACTTGAGGTGCCAGCTCAATTGCCAGTACCCGAATCCAATAAGTACTCCTTACGTTCAAAAAACCTAAATTCCTTAGAAGCCACGCATATTAATGGGGGGCCACTGCACTGTCTAGAGGTGGAAAACCCTGCTATGCATAATGAAATTTATAATCTTTGTAATTCAGTGGCAGAATATGGACCTAGTCATGATGGACACAGTGAACCAATTAGGCTAGACAATGATTCAGTGCATATAAAAGCAGGTGAAATTCAAGGAGGAGACGTGCAATATTATGGAAAAGACACATTTCAAAATGAGCTAGATAGACCTATAGATCACACTTTCTTTGGATCACCATTGAGTAGTGGCATGTCATTAGATTTTGGAGGACTCAGCAGTCCTCCATTCCATTTAGAAGATTTCTTGTGCGATGACGAAATTATCCAGTACTTTGGGGCATAG 1740 0.4224 MGVIEEIGADVCSDIEVDDIRCQNIAEKDVSDEEIEAEELEKRMWKDSIKLKRIKERQKRPAQQAAEKQKPRPTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNLRAWWKEKVRFDKNGPAAIAKYEAECLAVSEAENNQNGNSQSILQDLQDATLGSLLSALMQHCDPPQRKYPLEKGNPPPWWPTGTEDWWVQLNLPYGQTPPYKKPHDLKKIWKVGVLTAVIKHLSPDIAKIRRHVRQSKCLQDKMTAKESGIWLAVLSREEALIRQPSSDNGTSGVTETLRGVPIENKQASASRDSDYDVDGADDGVGSVSSKEDRRNQLMDTEASDNLHNDSVQDQAEKQRRKKRLRPRSSATDKLPTPSHHKTLHDGTRSTLLDTNQMEEQVVGIQTHANEQGNVIDSTLRLVEKELEVPAQLPVPESNKYSLRSKNLNSLEATHINGGPLHCLEVENPAMHNEIYNLCNSVAEYGPSHDGHSEPIRLDNDSVHIKAGEIQGGDVQYYGKDTFQNELDRPIDHTFFGSPLSSGMSLDFGGLSSPPFHLEDFLCDDEIIQYFGA* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0199 579 MobiDBLite consensus disorder prediction 289 396 - -
Apr5g0199 579 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Apr5g0199 579 Coils Coil 23 43 - -
Apr5g0199 579 MobiDBLite consensus disorder prediction 289 315 - -
Apr5g0199 579 Gene3D - 73 148 IPR023278 GO:0003700|GO:0005634
Apr5g0199 579 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Apr5g0199 579 MobiDBLite consensus disorder prediction 53 84 - -
Apr5g0199 579 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Apr5g0199 579 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 564 IPR006957 GO:0005634
Apr5g0199 579 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 11 564 - -
Apr5g0199 579 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0199 Apr-Chr5 1797106 1801052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0199 16 445 EIL Transcription Factor Family AT1G73730 62.500 2.24e-180 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Apr5g0199 EIN3 4e-125 No_clan