Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0141 ATGGGTCGCCCACCCAGTAATGGGGGCCCCGCTTTTCGCTTCACTCAGGCTGAGGTAGGAGAAATGGAAGGTATTCTTCAAGAACACAACAATGCGATGCCAGCACGTGATGTTCTTGCAGCTCTTGCTGACAAGTTCAGTGCATCACCGGATCGCAAAGGCAAGATTACAGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAATAAGCGGTATGCTATAAGGGCAAAATCAAGTAAGACTCCTGGAAAGTTAAATATCACACCTATGCCTCGTGATGATGCAAACCCAGTAAGGAGTATGCCTCAAGGCCCTCAACAACCAACAGCTGCTCCAATTCCTGCTGCTTCAGGTTCAGTTCCAACAACAGTAAAAGCAACACCAGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGGAAGGGATGGAGCATGGTATGATGTAGCTAGCTTTATATCACACAGATATTTGGAGACCAGTGATCCGGAAGTGCTGATACGATTTGCTGGTTTTGGAGCTGAGGAAGATGAGTGGGTTAATGTTCGAAGGAATGTCAGACCACGCTCTTTGCCATGTGAATCATCAGAATGTGTTGCAGTCCTACCTGGAGATCTCATACTTTGTTTTCAGGAAGGTAAAGAGCAAGCCCTTTACTTTGATGCCCATGTGCTCGATGCTCAAAGACGGAGGCATGATGTAAGAGGCTGTCGCTGTAGATTTTTGGTTCGTTATGATCATGATCAATCAGAGGAAATTGTGCCACTTCGGAAGGTTTGCCGGCGGCCCGAAACTGATTACCGGTTACAGCAACTTCATGCTGTGAATGAGGTAGTCCCTGTGGATCAGCAGAAGAGTGGCATGAATCCAGCAAATGTTCATGCTGTAAGGGTCACTACTGAAACAGTGCCAAAACAGCTGATTGCAGCAAGCATTCACATGGAAACACAAGTTTTGCAAACAAATGTTCCTCATGCCCCACAAACTATGAATGTGAATGCAAAGAAAGCTGAAACTACTAGTGATGTTCAAGCAGGAAATTCCATCATTACCCCTGGAAGTGCCCCATTTACTAGTATCATTGCCACAAGCAATCTTCCTGAAGTGTCTAATCAAAACATGGCTGAAGGAAAATGA 1134 0.448 MGRPPSNGGPAFRFTQAEVGEMEGILQEHNNAMPARDVLAALADKFSASPDRKGKITVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDANPVRSMPQGPQQPTAAPIPAASGSVPTTVKATPENSVMEFEAKSGRDGAWYDVASFISHRYLETSDPEVLIRFAGFGAEEDEWVNVRRNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAVNEVVPVDQQKSGMNPANVHAVRVTTETVPKQLIAASIHMETQVLQTNVPHAPQTMNVNAKKAETTSDVQAGNSIITPGSAPFTSIIATSNLPEVSNQNMAEGK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0141 377 CDD homeodomain 13 75 IPR001356 GO:0003677
Apr5g0141 377 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 346 IPR039276 -
Apr5g0141 377 SUPERFAMILY Homeodomain-like 12 78 IPR009057 -
Apr5g0141 377 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Apr5g0141 377 Gene3D - 10 84 - -
Apr5g0141 377 Pfam SAWADEE domain 133 259 IPR032001 GO:0003682
Apr5g0141 377 SMART HOX_1 7 81 IPR001356 GO:0003677
Apr5g0141 377 Gene3D - 130 191 - -
Apr5g0141 377 MobiDBLite consensus disorder prediction 78 124 - -
Apr5g0141 377 Gene3D - 192 264 - -
Apr5g0141 377 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0141 Apr-Chr5 1236323 1244837 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0141 5 1236323 1244837 Apr5g0141 5 1236323 1244837 ECH