Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0116 ATGATGTCATCCTCCACCGTCGCCAACGCCGACACTTCAACCTCATTCCTTTCCACTCCGACCAAAACTCCATCGGAGAAGTCATCGTTGAAGACAAGTAGCAGAAGGAACCACCTCGATTCCAAGTCCCGCTTCGAAGCCTACAACCGCCTCCAAGCCGCCGCTGTGGCCTTCGGCGAGACGCTTCCCATTCCGGAGATCGTCGCCGTCGGAGGCCAATCGGACGGTAAGAGCTCTCTCCTGGAAGCGCTCCTCGGATTCCGATTCAACGTTCGCGAGGTGGAGATGGGCACTCGCAGACCCCTCATCCTCCAAATGGTTCACGATCCCTCCGCTCTCGAACCTCGCTGCAGATTCCAGGAAGAGGATTCAGAAGAGTATGGAAGTTCTGTGGTTTTGGCATCTACCATTGCAGACATTATAAAGTCCCGAACTGAGGCACTTCTGAAGAAAACGAAGACAGCAGTTTCTCCTAAACCAATTGTAATGAGAGCTGAGTATGCACATTGTCCTAACCTTACCATTATTGACACCCCGGGGTTTGTTCTTAAGGCAAAGAAGGGTGAGCCGGAGAACACGCCTGAAGAAATTCTTTCTATGGTGAAGTCCTTGGCTAGTCCTCCCCACCGCATACTTTTGTTCCTTCAGCAAAGTAGTGTGGAGTGGTGCTCCTCATTGTGGTTGGATGCCATTCGTGAAATTGACCCAACCTTTAGACGGACAGTAATTGTTGTCTCCAAATTTGATAATCGACTCAAGGAATTTAGTGACAGGTGGGAAGTGGATCGTTATTTGAGTGCAAGTGGTTACCTTGGAGATAACACTCGCCCATTTTTTGTGGCCTTGCCAAAGGATAGGGGTAATGTTTCAAACGATGAGTTCCGCAGACAGATTTCTCAGGTGGACTCAGAGGTTCTTCATCATCTCCGTGACGGTGTCAAGGGGGGTTTCGATGAAGAAAAGTTCAAGTCCTATATTGGTTTTAGCCGTCTGAGAGAGTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCCGCGCCAGCAACACTTGCTTTGCTTGAGCAACGCTGCAGTGAAGTGACTTCTGAACTAGCTAGAATGGATTCAAAAATACAGGCCACTTCAGATATTTCCCATCTTAGGAAATTCGCAATGCTACATGCTGCTTCTATCAGCAACCATGTGGGTGCATTGATTGATGGTGCAGCGGATCCTTCCCCTGAGCAGTGGGGAAAAACAACAGTAGAAGAGAGGTCACAGAGTGGTATTGGGGTTTGGCCTGGTGTCATTACCGATGTAAATCCCCCCAATGCCACTCTTCGTCTTTATGGAGGAGCTGCATTTGAGAGGGTAATGCATGAATTTCGCTGTGCTGCATATTCCATAGAATGCCCCCCAGTGTCAAGGGAGAAGGTTGCAAATATATTACTTGCCCATGCTGGCCGAGGTGGGGGAAGAGGAATAACAGAGGCTGCTGCAGAGATTGCACGAGCTGCTGCTAAGTCATGGCTTGCTCCCCTTCTTGACACTGCTTGTGATCGACTTGCTTTTGTCTTAGGAAGTTTATTTGATTTGGCTCTAGAAAGGAACCGCAGTCATGGTTCAGAATGTGGGATTAAAGTGGGAAACATGGATGGCTATGTAGGTTTTCACGCTGCTTTAAGGTGTGCTTACAGTCGCTTTACAAATGATCTTGCTAAGCAGTGCAAGCAGCTCGTTAGGCACCACCTTGATTCAGTTACTAGTCCGTACTCACAGGTCTGCTACTTCAATGACTTTCAACCATGTTCTGGCCTAAATGCTCCCACTAACAACAAATTCAGCCAGGCTTCAGCCTCTTCGTTTTTCCTTGAGTTGAGTGATACTAGTTCAGCATCCCATAATGTAATGAGGGATCAGGAAAATATACCTCCAGAAAATAATGCACAGGAAACCACGCCAGGTAAAGCCGCAGAAGCTAGAGACGCTTTGCGAGAAAGTCACATGACAATCCCTGAGACCCCTTCTCCTGATCAGCCAGGTGATCCAGTATATGGGGTGGCTAAAAAGGAGCTAGGAATTTGCAATGATGTGGGGCCAAGAAAGAGAGTGTCCAGAATGGGAGGGAATAGCAAAAATTCTGACTATATTAGACTGCAAAATGGTGGCATTTTATTTGGAAATGGGGAGAGATCAGGTTCTGCTTATACAGAAATCTGTTTATCAGCTGCTCAGCATTTTGCACGTATACGTGAAGTTCTTGTTGAGAGAGGAGTGACATCAACATTAAATTCTGGATTCCTAACCCCTTGCCGAGATCGGTTATTCGTGGCTCTTGGGTTAGATTTATTCGCTGTGAATGATGAGAAATTCATGGACATGTTTGTTGCCCCTGGTGCCATAGATGTGCTACAAAATGAACGAGAGTCTCTCATAAAGCGGCAGAAGATACTGCATTCTTGCTTGAATGAGTTTAAAAACGTTGCTCGGGCTCTTTGA 2481 0.47 MMSSSTVANADTSTSFLSTPTKTPSEKSSLKTSSRRNHLDSKSRFEAYNRLQAAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDPSALEPRCRFQEEDSEEYGSSVVLASTIADIIKSRTEALLKKTKTAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPEEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDAIREIDPTFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDNTRPFFVALPKDRGNVSNDEFRRQISQVDSEVLHHLRDGVKGGFDEEKFKSYIGFSRLREYLESELQKKYKEAAPATLALLEQRCSEVTSELARMDSKIQATSDISHLRKFAMLHAASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGVWPGVITDVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGITEAAAEIARAAAKSWLAPLLDTACDRLAFVLGSLFDLALERNRSHGSECGIKVGNMDGYVGFHAALRCAYSRFTNDLAKQCKQLVRHHLDSVTSPYSQVCYFNDFQPCSGLNAPTNNKFSQASASSFFLELSDTSSASHNVMRDQENIPPENNAQETTPGKAAEARDALRESHMTIPETPSPDQPGDPVYGVAKKELGICNDVGPRKRVSRMGGNSKNSDYIRLQNGGILFGNGERSGSAYTEICLSAAQHFARIREVLVERGVTSTLNSGFLTPCRDRLFVALGLDLFAVNDEKFMDMFVAPGAIDVLQNERESLIKRQKILHSCLNEFKNVARAL* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0116 826 MobiDBLite consensus disorder prediction 633 648 - -
Apr5g0116 826 SMART dynamin_3 41 284 IPR001401 GO:0003924|GO:0005525
Apr5g0116 826 Coils Coil 351 371 - -
Apr5g0116 826 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 61 348 IPR030381 GO:0005525
Apr5g0116 826 MobiDBLite consensus disorder prediction 1 38 - -
Apr5g0116 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 355 IPR027417 -
Apr5g0116 826 MobiDBLite consensus disorder prediction 1 28 - -
Apr5g0116 826 Gene3D - 32 400 IPR027417 -
Apr5g0116 826 CDD DLP_1 62 348 IPR001401 GO:0003924|GO:0005525
Apr5g0116 826 Pfam Dynamin family 67 247 IPR045063 -
Apr5g0116 826 PANTHER DYNAMIN-LIKE PROTEIN C 41 825 - -
Apr5g0116 826 MobiDBLite consensus disorder prediction 633 658 - -
Apr5g0116 826 PRINTS Dynamin signature 64 82 IPR022812 -
Apr5g0116 826 PRINTS Dynamin signature 89 106 IPR022812 -
Apr5g0116 826 PRINTS Dynamin signature 167 184 IPR022812 -
Apr5g0116 826 PRINTS Dynamin signature 236 252 IPR022812 -
Apr5g0116 826 PANTHER DYNAMIN 41 825 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0116 Apr-Chr5 1022517 1027500 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0116 5 1022517 1027500 Apr5g0116 5 1022517 1027500 ECH