Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0105 ATGGCAATTTGTTCCTCAGCTTCCTCTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCAATGTCGTCGTTTGATTCTTCCAACAACTCAAAGGCATGGATCATCCATGGCATTGTGGCCGGAGTTGCGATTGCAGCAGCGGTGGGTGCACGCGCTTACATGACCCGATTCAACAAATTTCGGAGTCGAGTTGTTGGTATCATACCCGCCCGATTCGCTTCCTCTCGCTTCCAGGGAAAGCCTCTAGTTCAAATCCTTGGCAAACCCATGATTCAGAGAACATGGGAAAGGGCAAAGCTGGCAGCTACATTGGATCATGTTGTTGTGGCAACTGATGATGAAAAGATTGCTGACTGCTGTCGACAATTTGGAGCTGATGTTATTATGACATCAGAATCTTGCAGAAATGGTACTGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAAATATGATATTGTTGTCAACATTCAGGGTGATGAGCCACTTATAGAACCTGAGATAATAGATGGTGTTGTGAAAGCTTTGCAGGCAGCTCCGGATGCAGTTTTCAGCACTGCAGTCACGTCTTTAAAGCCTGAAGATGCACATGATCCAAATAGAGTGAAATGTGTGGTAGATAATCGTGGCTATGCCATCTATTTTTCACGAGGACTAATCCCATTTAACAAGTCAGGGAAGGTCAATCAACAGTTCCCATATTTGCTTCATCTTGGGATTCAGAGCTATGATGCAAAGTTTCTAAAGATATACCCAGAACTTAAACCAACTCCATTGCAACTCGAGGAGGATTTGGAGCAGCTTAAAGTCCTTGAGAATGGCTACAAGATGAAGGTAATAAAAGTTGATCATGAGGCGCATGGGGTTGACACTCCTGAAGATGTTGAAAAGATAGAATCTCTAATGCGTGAGAGGAACTTGTCTTGA 936 0.437 MAICSSASSSSSSSSSSSSSSSMSSFDSSNNSKAWIIHGIVAGVAIAAAVGARAYMTRFNKFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLAATLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQKLGKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDAKFLKIYPELKPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVEKIESLMRERNLS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0105 311 CDD CMP-KDO-Synthetase 65 304 IPR004528 GO:0008690
Apr5g0105 311 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 56 306 IPR029044 -
Apr5g0105 311 PANTHER BNAA05G35640D PROTEIN 27 311 - -
Apr5g0105 311 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 64 306 IPR004528 GO:0008690
Apr5g0105 311 Pfam Cytidylyltransferase 68 278 IPR003329 -
Apr5g0105 311 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 68 299 IPR004528 GO:0008690
Apr5g0105 311 SUPERFAMILY Nucleotide-diphospho-sugar transferases 66 308 IPR029044 -
Apr5g0105 311 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g0105 311 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 27 311 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0105 5 935859 941620 Apr5g0105 5 935859 941620 ECH