Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0104 ATGGCCACACTCTTCGATTCCCTCGCCGTCGTTCCTCTCCCTTCCGCCCCCTTCTCTCCGGTCACCGCCCGCCGCACCACCGCCAAGTTCCCCCACTACGCCGGCCTCAAACTCAGACCCCTCGCCGCCACTCGCTTCGCCCCTTCCTCCTCTCCCAGAATCGCTTCCCGCACCGCTCGCATCGTCTGCGAGGCTCAGGATACTGCCCTCGATGTGGCTCCTATTAATGATGCAAATTGGCAATCCCTTGTCCTTGAATCTGAATCTCCCGTTTTGGTTGAATTTTGGGCCCCATGGTGTGGTCCCTGCCGAATGATTCACCCTATAATTGATGAGCTAGCAAAGCAATATGCTGGGAAGCTAAAGTGTTACAAACTTAACACAGATGAGAGCCCTTCAACTGCTACAAGGTATGGCATTCGAAGCATCCCAACTGTTATGATATTCAAGAATGGCGAGAAGAAAGATACAGTTATTGGTGCTGTGCCCAAGTCAACATTGACCACAAGCATAGAAAAATTCTTATGA 528 0.5189 MATLFDSLAVVPLPSAPFSPVTARRTTAKFPHYAGLKLRPLAATRFAPSSSPRIASRTARIVCEAQDTALDVAPINDANWQSLVLESESPVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0104 175 PRINTS Thioredoxin family signature 91 99 - -
Apr5g0104 175 PRINTS Thioredoxin family signature 99 108 - -
Apr5g0104 175 PRINTS Thioredoxin family signature 139 150 - -
Apr5g0104 175 TIGRFAM thioredoxin: thioredoxin 76 174 IPR005746 GO:0015035
Apr5g0104 175 Pfam Thioredoxin 72 172 IPR013766 -
Apr5g0104 175 CDD TRX_family 78 172 - -
Apr5g0104 175 PANTHER GEO12009P1 2 175 - -
Apr5g0104 175 SUPERFAMILY Thioredoxin-like 67 175 IPR036249 -
Apr5g0104 175 Gene3D Glutaredoxin 72 175 - -
Apr5g0104 175 ProSitePatterns Thioredoxin family active site. 92 110 IPR017937 -
Apr5g0104 175 ProSiteProfiles Thioredoxin domain profile. 63 175 IPR013766 -
Apr5g0104 175 PANTHER THIOREDOXIN M-TYPE PROTEIN 2 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0104 Apr-Chr5 931722 935025 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0104 5 931722 935025 Apr5g0104 5 931722 935025 ECH