Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0079 ATGGCGTCGGAGAGTGAGGCTTCTGAGAGGGAGACGGAGATTGAGCCGGCTGCGTCGGCGGAGACTGGGGAGGTTCCAACCACATCGGAGACTGGGGAAGCTGCGACGGCGACTGGGGAGACTGCGAATGCGCCGGAGACTGAGGAGCTTCCGACCACAACGGAGGCTGCGACGGAGACTGAAAAGGTTCCTACCACAACGGATGTTGGGGAGGCTTCCACGGAGACTGAAGAAGTTCCGACCACAACAGAGACTGGGGAGGCTGCGACGGAGACGGAGATTGAGGAGGATGCCACGGAGACTGGGGAGGCTGAGACGGCTCCGGAGACTGAGGAGGCTGTGACTGCTCCGGAGACTGAGGAGGATGCCACGGAGACTGAGGAGTTTTCGACCACAACGGAGATTGGGGAGGCTGTGACGGCGCCGGAGACTGAGGAGACTGCGACGAATACTGAAGAGGTTCCAAAGGTAACGGAGATTGAGGAGATTGGGCCGGCAAAGAAGATTGAGGAGGTTAAGAGTTTCCCTAAAAAATCGCCTCGACTAATACACAGTTTAGTTCTATCAGAAGCTCAAAGAAAAGTGATAGGAGCGTGGTACAGGGATTTTATACCGATTGGAACTGGCAGACACGGCAATGTTTTCCAGTGCAAGAACCATTTGAATGACCAGATTTTTGCAGTCAAGGTTATTCCCATTCCGGATAATGAGAAAGGGAACGGTGTTCCATACAGGATTATAAGAGAAATCTCTGTTCTTAAGGAAATACAGGACCATATCAACATTGTGAGGTTGCTGGATGTGCTGCCCAGCATGGATGCCATGTTTCTTGTTTTCGAGCATGTTGACATCGATCTCCTTGATTTCATGAGAAACCCAGTGTTGTTTATATATCCAAATATGATAAAAAATTTTGTACATCAAATCCTTAATGCTGTAGCACACTGCCATTCTCGCAAAATTATTCACAGAGATTTGAAACCTAACAATATTCTGATTCATTTCCGTACCCGTGTTGTGAAGATAGCAGACTTTGGTGCAGCTAGAACAATTGATGTTCCTTTTTCGTCGTACTCTGGAGATGTGGGTTCTTCTTGTTATAAGGCACCTGAACTCTTGTTTGGCTCCACCTACTACTCAACTTCAGTTGATATCTGGTCCGTGGGTTGTATGTTTGGTGAGATGGCTCTTGGCCGGCCTCTATTCTCTGCTGATAGTGATTGGAAGATGCTGAATGAGATGTTTACCTTGCTTGGTACCCCAACAGAAGAAACCTGGCCCGGAGTGACTTCTTTATGCAACTATATTGACGTAATGGGCCCTCCAAAGAAGCCGAAGGACCTGGCACTTGAGTTTCCTAAACTCGACTCAGATGCTGTTGATCTTCTTTCGAAAATGCTTTGCCTGTGTCCAAAGTATAGAATTTCAGCTGCAGATGCTGTTTTGCACCCGTATTTCAAGGGTATATGA 1470 0.4823 MASESEASERETEIEPAASAETGEVPTTSETGEAATATGETANAPETEELPTTTEAATETEKVPTTTDVGEASTETEEVPTTTETGEAATETEIEEDATETGEAETAPETEEAVTAPETEEDATETEEFSTTTEIGEAVTAPETEETATNTEEVPKVTEIEEIGPAKKIEEVKSFPKKSPRLIHSLVLSEAQRKVIGAWYRDFIPIGTGRHGNVFQCKNHLNDQIFAVKVIPIPDNEKGNGVPYRIIREISVLKEIQDHINIVRLLDVLPSMDAMFLVFEHVDIDLLDFMRNPVLFIYPNMIKNFVHQILNAVAHCHSRKIIHRDLKPNNILIHFRTRVVKIADFGAARTIDVPFSSYSGDVGSSCYKAPELLFGSTYYSTSVDIWSVGCMFGEMALGRPLFSADSDWKMLNEMFTLLGTPTEETWPGVTSLCNYIDVMGPPKKPKDLALEFPKLDSDAVDLLSKMLCLCPKYRISAADAVLHPYFKGI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0079 489 MobiDBLite consensus disorder prediction 1 17 - -
Apr5g0079 489 MobiDBLite consensus disorder prediction 129 148 - -
Apr5g0079 489 ProSitePatterns Protein kinases ATP-binding region signature. 206 229 IPR017441 GO:0005524
Apr5g0079 489 Pfam Protein kinase domain 203 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0079 489 Gene3D Phosphorylase Kinase; domain 1 191 289 - -
Apr5g0079 489 MobiDBLite consensus disorder prediction 89 107 - -
Apr5g0079 489 SMART serkin_6 200 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0079 489 ProSiteProfiles Protein kinase domain profile. 200 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0079 489 PANTHER CYCLIN-DEPENDENT KINASE 207 487 - -
Apr5g0079 489 Gene3D Transferase(Phosphotransferase) domain 1 290 489 - -
Apr5g0079 489 MobiDBLite consensus disorder prediction 1 156 - -
Apr5g0079 489 PANTHER CELL DIVISION PROTEIN KINASE 207 487 - -
Apr5g0079 489 MobiDBLite consensus disorder prediction 22 88 - -
Apr5g0079 489 MobiDBLite consensus disorder prediction 114 128 - -
Apr5g0079 489 SUPERFAMILY Protein kinase-like (PK-like) 199 488 IPR011009 -
Apr5g0079 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0079 Apr-Chr5 740408 743950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0079 206 489 Core Cell Cycle Gene Families AT3G48750 46.667 4.01e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Apr5g0079 Pkinase 1.6e-64 CL0016