Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2697 ATGGTCTTCCCGTCCCTTCCAATCTATCTAGATCCACCCAACTGGTCACAACAGCAAGCAGGGATTGGCACCCACAACTCTCAGATTCCACCACTTCCGCAGCCACCATCAGCAGCGGTGACGGCTGGTGTTGGAAGTGGTGGTTATCAGGGCTCTATAAGGCCAGGATCAATGGCTGATAGAGCCAGGTTGGCGAAGATACACCAACCTGATGCAACACTAAAATGCCCACGATGTGAATCTACAAACACCAAGTTCTGCTACTACAACAACTATAGCCTTTCACAGCCTCGTCACTTTTGCAAGACTTGTCGTCGTTACTGGACTAGAGGAGGTGCACTCAGAAACGTGCCAGTTGGAGGCGGTTGTAGAAGGAACAAAAGAAATAAAGGAAGCAATAGATCGAAATCTCCTATGAAACCTGCAACAGGTTCTACCTCTGCAAGTGCAAATTCTTCTTCTAGTGGCTGCACTAGTGATCATGTGATGATGGGTCATTTGCAAACTCAAACACCAACTCAATTTCCATTCTTGGCCTCTTTGCATCATTATAATAACAGTGAATACATTTCTGGGGGCATTGGCTCGCATTTTGGGCCAATCTCAACATCTTTGGTGGCTAGAAATGGCAACACTAGTGCTGGCAGTGATGTTGAGTTTCAAATTGGTACTAGTTCATCCTCATCGCTTGGTAATAGTGGCGCGTCTATGTTGTCAAATGGCCTTGGTGAGCAATGGAGGTTGAACAATTTGCAACAAGTTCAACAACAGTTCCCTTTCTTGAGCACTAGTTTGGAACCACAAATTGGGGTGTTTCAGTTTGGTGGAGAAAATAATGCTGAACCGCCAAGTTATGCAAAGGATGGAAACCGGTTTATTCGTTCTAAAATGGATTCTACTTCTAGTGTTAGTGGAATAATGCCTCAGCTTAACTCAATAAAAATGGAAGAAAATCAAGGGTTGAGTTTGCCAAAAAATCTCTTGATGAGCGGTTCGGGAAATGATCTATTTTGGAATGGAAGTGGCAATGCATGGAGTGAAGTTCCTAGTTTCACTCCTGCACCGAGTCACATGTTGTGA 1080 0.4454 MVFPSLPIYLDPPNWSQQQAGIGTHNSQIPPLPQPPSAAVTAGVGSGGYQGSIRPGSMADRARLAKIHQPDATLKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRNKGSNRSKSPMKPATGSTSASANSSSSGCTSDHVMMGHLQTQTPTQFPFLASLHHYNNSEYISGGIGSHFGPISTSLVARNGNTSAGSDVEFQIGTSSSSSLGNSGASMLSNGLGEQWRLNNLQQVQQQFPFLSTSLEPQIGVFQFGGENNAEPPSYAKDGNRFIRSKMDSTSSVSGIMPQLNSIKMEENQGLSLPKNLLMSGSGNDLFWNGSGNAWSEVPSFTPAPSHML* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2697 359 MobiDBLite consensus disorder prediction 118 161 - -
Apr4g2697 359 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 21 352 - -
Apr4g2697 359 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 352 IPR045174 GO:0003700|GO:0006355
Apr4g2697 359 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Apr4g2697 359 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Apr4g2697 359 Pfam Dof domain, zinc finger 72 128 IPR003851 GO:0003677|GO:0006355
Apr4g2697 359 MobiDBLite consensus disorder prediction 135 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2697 Apr-Chr4 35599370 35601225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2697 1 130 C2C2-Dof Transcription Factor Family AT2G37590 52.174 3.32e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Apr4g2697 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2697 - - gmx:102662809 545.428