Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0099 ATGGCATCTCAAAACTTGGTCACCCATTTAACAGCACTTGTTGTAGATGACAATATACTTAACCGAAAGATTCATCAAGAGATGTTGAAGAGTGCTGGAGTGAAAAATCAGGGAGTGAAAAATGGCAAAGAAGCAGTGGACATTCACTGCCATGGACAAAGATTTGACCTAATTCTCATGGACATGGATATGCCTATTATGAATGGTATTGAGGCAACAAAGGAACTTCGTTTAATGGGCGTTCGTAGCATGATTGTTGGTGTCTCGTCACACTCTAGGGAAGCAGAAATACGAAAATTTATGGAAGCCGGGCTGGATGACTACCAAGAGAAACCCTTAAACCCTGCTAAGTTTAGTTCAATTCTTAATAGGATCAACCCCAATTTTACTGGTAAGTGA 399 0.4035 MASQNLVTHLTALVVDDNILNRKIHQEMLKSAGVKNQGVKNGKEAVDIHCHGQRFDLILMDMDMPIMNGIEATKELRLMGVRSMIVGVSSHSREAEIRKFMEAGLDDYQEKPLNPAKFSSILNRINPNFTGK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0099 132 Gene3D - 1 128 - -
Apr4g0099 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 128 - -
Apr4g0099 132 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Apr4g0099 132 SUPERFAMILY CheY-like 9 125 IPR011006 -
Apr4g0099 132 SMART REC_2 10 122 IPR001789 GO:0000160
Apr4g0099 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 128 - -
Apr4g0099 132 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
Apr4g0099 132 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0099 Apr-Chr4 900410 901018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0099 10 125 Response Regulator Gene Family AT3G04280 48.305 8.57e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr4g0099 Response_reg 1.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0099 - - gmx:100794931 201.445