Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2143 ATGCCGGTGGCGAGGCGAGAGACGTGCGATGCCAGAGTGATTGCTCATGTGGACATGGATTGCTTCTACGTCCAAGTGGAACAGAGAAACCAACCAAATCTAAGGGGCTTGCCCACTGCAGTTATACAGTACAACTCCTTCAAAGGTGGGGCCCTCATTGCTGTAAGCTATGAGGCTCGCAAATGTGGCGTCAAACGTTCAATGAGGGGTGATGAAGCTAAGGAAGCGTGCCCGCAAATTCAATTAGTCCAAGTCCCTGTGGCGCGTGGTAAAGCTAATCTCAACTCATATAGGAATGCAGGTTCAGAGGTTGTTTCTGTTCTTTCACAGAAGGGGCGTTGTGAGAGGGCTTCAATTGATGAGGTTTATCTTGACCTCACTGAAGCTGCTGAAACTATGTTGATGGAAACTCCTCCCGAAAGCATGCAAGACTTTGAGGAGGAAATTCTCAAGTCGCATGTTTTGGGCCTGGAAATTGAGGATGGAAGTGACAACAAAGAAGAAATTAGGAAGTGGCTATGTAGGACTGATGCTAGTTACCAAGATAAACTATTAGCTTGCGGGGCTCTCATTGTTGCTGACCTCAGGATGCAGGTGCTGAAAGAGACAGAATTCACATGTTCTGCTGGTATTGCTCATAATAAGATGCTGGCTAAACTTGCTAGTGCTATGAACAAACCTGCACAACAAACGGTTGTGCCACATTCATCTGTTGAAGGGTTGCTTGCATCTTTGCCTATAAAGAAAATGAAACATCTTGGGGGAAAGCTGGGGAGTTCCTTACAGAGTGATCTTGGTGTCAACACTGTTGGTGATCTGCTTCAGTTTTCAGAGGAGAAGCTACAACAATGGTATGGGATCAATACTGGTACTTGGTTGTGGAATATTGCAAGAGGAATCAGTGGGGAAGAAGTTGAGGGGCGACTACTTCCTAAGAGCCATGGTTCTGGCAAGACATTTCCTGGGCCTCAGGCTTTGAAGACTATTGATTCTGTTCGGCACTGGCTTAATGAACTGTGTGAAGAGCTGAATGAACGCCTTCATTCCGACCTGGATCAAAATAAACGGATTGCTCACACGCTGACTCTGCATGCTAGAGCATATAAGACAGGGGATTCAGATTCACATAGAAAGTTCCCTTCTAAATCTTGCCCTTTAAGATATGGGACTAGAAAGATTCAAGAGGATGCCCTAATTTTATTTCAATCTGGGTTACGTGACTTTTTGGGGATCTACAACTGTAAGGCTCATGGAAGTGAAAATAACAACTGGGGAGTAACATCACTTTCTGTTTCTGCGAGTAAAATTGTCTCCATACCTTCTGGGACACATTCAATTGTTAAATACTTTGGCGGGCCAGTTCCATCCAGTTCTACATCAAATCAATCACTAGATATTGTTGTTGATGAAGCTGCACCATCATCGCCTTCAGGTGGTGAAAATTGTTTGGGATTGGTTCCCTATGAGTTACAGCTTGAATATCCTGAAGAGACAGGAATGAAGCATTCAAAGGCTTGTTTAGATCAACAGGATACACACTGCAATTTTTCCCATAAAGGCTTGACTGAAGTTTCCTACCTCATGTCACCCCCAGGAAGTGAAGACAGAATGATGCATGATAAGCCACGTAGAGATTTGCCTGCAAATGATCCTAGGCTTGTACCGGGTACCTCTAGTTCAAAAACAGTTGGGAAGAAAAAGACAGTGGGAAAGAATCTTCAAGGGAGTTGTTCTATTGTACAATTCTTTAATAATTACCATACTTCCCAGTCTTCATTGGGGCAGAAGAATGTTACAAATGCCCACGGTGTGAAAATATCATCATCACTTGGATCTCAGTCTGCGAGTGATAGTTATTCAAGTTGTAATCAAGTTGAGCTGCCTGCTGAGGACCCTCATGACGAGATTGATGCAAACAACAGTGCATCTAGCACAGCTAATATACCACGAGGAAGGCAATCTTGGGGTTATAACATTGACGAGATTGACCCCTCTATCATCGATGAATTGCCACCAGAAATTCAGGATGAGTTTAGAACCTGGCTTAGGCCACATAAGCGGCCTAGTGTGGTTAAACGAGGTTCTAGTATTACTCACTATTTCTTACCTGACAAACGTAGATAA 2124 0.4388 MPVARRETCDARVIAHVDMDCFYVQVEQRNQPNLRGLPTAVIQYNSFKGGALIAVSYEARKCGVKRSMRGDEAKEACPQIQLVQVPVARGKANLNSYRNAGSEVVSVLSQKGRCERASIDEVYLDLTEAAETMLMETPPESMQDFEEEILKSHVLGLEIEDGSDNKEEIRKWLCRTDASYQDKLLACGALIVADLRMQVLKETEFTCSAGIAHNKMLAKLASAMNKPAQQTVVPHSSVEGLLASLPIKKMKHLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQQWYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQALKTIDSVRHWLNELCEELNERLHSDLDQNKRIAHTLTLHARAYKTGDSDSHRKFPSKSCPLRYGTRKIQEDALILFQSGLRDFLGIYNCKAHGSENNNWGVTSLSVSASKIVSIPSGTHSIVKYFGGPVPSSSTSNQSLDIVVDEAAPSSPSGGENCLGLVPYELQLEYPEETGMKHSKACLDQQDTHCNFSHKGLTEVSYLMSPPGSEDRMMHDKPRRDLPANDPRLVPGTSSSKTVGKKKTVGKNLQGSCSIVQFFNNYHTSQSSLGQKNVTNAHGVKISSSLGSQSASDSYSSCNQVELPAEDPHDEIDANNSASSTANIPRGRQSWGYNIDEIDPSIIDELPPEIQDEFRTWLRPHKRPSVVKRGSSITHYFLPDKRR* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2143 707 MobiDBLite consensus disorder prediction 553 568 - -
Apr3g2143 707 Gene3D - 305 438 IPR036775 GO:0003684|GO:0006281
Apr3g2143 707 MobiDBLite consensus disorder prediction 530 568 - -
Apr3g2143 707 Gene3D - 89 233 IPR043128 -
Apr3g2143 707 Gene3D - 247 303 - -
Apr3g2143 707 Pfam impB/mucB/samB family 17 222 IPR001126 GO:0006281
Apr3g2143 707 MobiDBLite consensus disorder prediction 534 548 - -
Apr3g2143 707 PANTHER DNA POLYMERASE ETA 6 689 - -
Apr3g2143 707 Pfam impB/mucB/samB family C-terminal domain 311 439 IPR017961 GO:0003684|GO:0006281
Apr3g2143 707 PIRSF DNA_pol_eta 6 701 - -
Apr3g2143 707 MobiDBLite consensus disorder prediction 638 652 - -
Apr3g2143 707 MobiDBLite consensus disorder prediction 631 653 - -
Apr3g2143 707 Gene3D - 21 88 - -
Apr3g2143 707 PANTHER DNA POLYMERASE ETA 6 689 - -
Apr3g2143 707 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 310 438 IPR036775 GO:0003684|GO:0006281
Apr3g2143 707 ProSiteProfiles UmuC domain profile. 14 254 IPR001126 GO:0006281
Apr3g2143 707 SUPERFAMILY DNA/RNA polymerases 10 305 IPR043502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2143 Apr-Chr3 37327272 37333853 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2143 3 37327272 37333853 Apr3g2143 3 37327272 37333853 ECH