Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2141 ATGGAAGGTTTTCACCCTTCTATGACCTCTCCATTTTCTTACACATTTCCTATCAGTGGTGCTGGTAGTAGTAATATCACCACTGCCGCAGGCACTTACAACACTTCTTCTACCACTCCATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAAAGACTTCTTGACCGTGTCTTAGCGTTCCTTCCTCCTCCTGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCTCTTCTCTTCTCCAACACCTTTCTTGAATTATACCTACAAGTTTCACCACGCCGCTACTGGTTCATGTTCTTCAAGCACCACAAGACCGGCCGCAAGAGCTACATCTACAAGAACAACAACAACAACAACAACAACAACAATAACAATGGTAGTAGTGGTTGTGGACATGGTGCAGCCTCATCTTGTGAAGAAGGGTACCTCTTTGATCCCTATGACATGGCATGGTACCGTATTTCCTTTGCTTTGGTTCCCTGTGGCTTCTCTCCAGCTTCTTCATCTTCTGGTTTACTATGTTGGGTTTCTGATGAGGCTGGTCCAAAGACCATGCTTCTCTGCAACCCTATGCTTGGTTCTTTGACTCAGTTACCTCCCACTTTGAGACCAAGACTCTTTCCTTCCATTGGCTTAACCATTAGCCCCACTTGCATAGATGTTACTGTTGCTGGGGATGACATGATATCTCCTTATGCAGTGAAAAATTTGACTTCTGAAAGCTTTCACATTGATGCAGGTGGGTTTTATTCGTTGTGGGGAACCACCTCTTCTTTGCCTAGGCTTTGTAGCCTTGAATCTGGTAGAATGGTTTATGCTGAAGGCAAATTCTACTGCATGAATTGTAGTCCTTTTAGTGTGTTGGCTTATGACATCACATCAAACACTTGGTTCAAAATTCAAGCACCTATGAGGCGGTTCCTTAGGTCTCCTAGCCTTGTTGAATGCAAGGGAAAGTTGCTTCTAGTTGCGGCTGTAGAGAAGAGCAAGCTTAACGTACCAAAGAGTTTGAGGGTGTGGAGTTTGCAGGCTTGTGGAACTATGTGGGTGGAGTCAGAGAGAATGCCACAACAACTTTATATTCAGTTTTCTGAGTTGGAAGTTGGGAATGGTTTTGAATGTGTAGGGCATGGAGAGTTTATTGTTATCATGATTCGTGGAACAGACAAGGCCTTGCTGTTTGATATATGCAGGAAGAGGTGGCAGTGGATTCCACCTTGTCCTTACACAGCACATGATGGCTTTGAATTGCATGGTTTTGCCTATGAACCTAGACTTGCCACCCCAGTTACTGGCCTCCTTGATCAATTGGCACTTCCCTTTCAGAGTTTTAATGCTTGA 1350 0.4452 MEGFHPSMTSPFSYTFPISGAGSSNITTAAGTYNTSSTTPWMNSRIWSKLPQRLLDRVLAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVSPRRYWFMFFKHHKTGRKSYIYKNNNNNNNNNNNNGSSGCGHGAASSCEEGYLFDPYDMAWYRISFALVPCGFSPASSSSGLLCWVSDEAGPKTMLLCNPMLGSLTQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDAGGFYSLWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNTWFKIQAPMRRFLRSPSLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFSELEVGNGFECVGHGEFIVIMIRGTDKALLFDICRKRWQWIPPCPYTAHDGFELHGFAYEPRLATPVTGLLDQLALPFQSFNA* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2141 449 SUPERFAMILY F-box domain 39 130 IPR036047 GO:0005515
Apr3g2141 449 Pfam F-box domain 47 81 IPR001810 GO:0005515
Apr3g2141 449 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 47 430 - -
Apr3g2141 449 PANTHER F-BOX/KELCH-REPEAT PROTEIN 47 430 - -
Apr3g2141 449 Gene3D - 109 416 IPR015915 GO:0005515
Apr3g2141 449 ProSiteProfiles F-box domain profile. 44 93 IPR001810 GO:0005515
Apr3g2141 449 SUPERFAMILY Galactose oxidase, central domain 72 413 IPR011043 -
Apr3g2141 449 SMART fbox_2 50 90 IPR001810 GO:0005515
Apr3g2141 449 Gene3D - 42 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2141 Apr-Chr3 37313410 37316495 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2141 3 37313410 37316495 Apr3g2141 3 37313410 37316495 ECH