Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2137 ATGAGATTCTCAGCGGTGAGTTTTGTCATAGTATTGGTTGTGGTAGATGAAGCCACATGTTTCACTTTCAACAGAGAGGAAAAGCTGTCAGAATACAAGAACAAACTTGAACAAAAATTAGCTAGTCCTTTGTTTCCCCCCATGGCATCACCAACCAAGATGAGTGGGAGGGTGTTGTACCTTAGTGAATATGGTGCAGACCCATCAGGGTCTGAAGAGAGTAGTGATGCAATTTTGAAAGCTGTGGATGAAGCCTTTGGGTTGCAAAAGGGTCTTGAATTGGTGAGAGGAGTGAATGACCTTGGTGGTGTTGTCATTGATTTACAAGGTGGGAACTACAAAATCAGCAAGCCCATTACATTCCCTTCATCTGGTGGTGGCAATGTTGTGGTGAAAGGAGGAACCTTGAGAGCGTCTGATACATTTCCTGGTGATCGACATCTAGTTGAGCTATGGTCATCAAATTCGGGTAAACTTGAGACTAAAGAATCACTGCATGTTGATGGCATCAACGACATTAAAGCTGAAACAAATGCAATTTATTATGAAGACATAACCTTCCGCGACATACTCTTTGATTCAAGCTATAGAGGAGGAGGAATATTCGTTGTTGATTCTGCTAGAACCCGGATCAACAATTGCTTCTTCCTTCATTTCACCACTGAAGGAATTCTGGTCCAGCAAGGACACGAAACCTTCATATCAAGTTGTTTTCTTGGGCAGCACTCAACCGTTGGTGGCGACAGAGGTGAGAAGGATTTTTCAGGGGTTGCCATTGATCTTGCTAGTAATGATAATGCTGTCACAGATGTTGCAATTTTCTCTGCAGCCATTGGTGTTATGCTAAGGGGTCAAGCTAACATTCTAACAGGGGTACATTGTTATAACAAGGCAACATCTTTTGGTGGTATAGGCATTTTGGTGAAATTGACAGGTAATTCACAAACTAGAATTGACAATTGTTATTTAGATTATACTGGCCTAGTCATGGAAGACCCTGTTCAGGTTCATGTCACCAATGGCTTATTTATTGGGGATGCTAGTATTTTATTGAAGTCTATTAAAGGTCAAATTTTTGGCCTAAATATTGTGGATAATATGTTTAGTGGTGACCCCAGTACGAAGGTTCCAATTGTAAATCTAGATGGGCAATTCAGTATCATTGATCAAGTGGTGATCGATAGAAACAATGTGAACGGCATGAGCTTGAGATCAACGGTTGGGAAGTTAACTGTGAGCGGAAACGGCACAAAATGGGTGGCTGATTTTTCATCGGTTTTGGTATTTCCTAATCGGATTAGTCATTTTCAATATTCATTTTATGCCCAAGACGAGCCTAAATTTGTAGCACATTCCGTGACCAATGTGTCAGATAATGTAGTTGTCGTGGAGAGTGAGAAAGATGCTAAAGGGTTGGTCTCCTTCATTGTTGAACAATAA 1440 0.4097 MRFSAVSFVIVLVVVDEATCFTFNREEKLSEYKNKLEQKLASPLFPPMASPTKMSGRVLYLSEYGADPSGSEESSDAILKAVDEAFGLQKGLELVRGVNDLGGVVIDLQGGNYKISKPITFPSSGGGNVVVKGGTLRASDTFPGDRHLVELWSSNSGKLETKESLHVDGINDIKAETNAIYYEDITFRDILFDSSYRGGGIFVVDSARTRINNCFFLHFTTEGILVQQGHETFISSCFLGQHSTVGGDRGEKDFSGVAIDLASNDNAVTDVAIFSAAIGVMLRGQANILTGVHCYNKATSFGGIGILVKLTGNSQTRIDNCYLDYTGLVMEDPVQVHVTNGLFIGDASILLKSIKGQIFGLNIVDNMFSGDPSTKVPIVNLDGQFSIIDQVVIDRNNVNGMSLRSTVGKLTVSGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEPKFVAHSVTNVSDNVVVVESEKDAKGLVSFIVEQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2137 479 PANTHER POLYGALACTURONASE QRT3 1 479 IPR039279 GO:0004650
Apr3g2137 479 Gene3D - 62 471 IPR012334 -
Apr3g2137 479 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 1 479 - -
Apr3g2137 479 SUPERFAMILY Pectin lyase-like 49 401 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2137 Apr-Chr3 37286907 37289798 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2137 3 37286907 37289798 Apr3g2137 3 37286907 37289798 ECH