Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2127 ATGGCGCCGAGCATTGGAGACCTCCAACTAACTTCTCCCGGCGCCGGCGAAGATTCCGACGACCTCGAAGATGTTCGCCTTCTTGATTCCTATGATAAAAACGACGTCGTCGTCGACGGCGACACAAAACGGATTCAGGTCAGAATCACCGGCATGACCTGCGCCGCTTGCTCTAACTCCGTCGAGGCGGCTCTCAAGTCCGTTAACGGCGTCGTTGACGCCTCCGTCGCGTTGCTCCAGCACAAAGCCGAGGTCGTTTTCAAGCCGAGCCTCGTGAAGGACGAAGACATTAAGAATGCGATTGAAGATGCAGGTTTCGAAGCGGAGATCTTACCGGAGCCTGTTTCGATGGGAGCCAAGGCGAACGGTGGCCCAGTCGTGGTGGGGCAGTTCACGATCGGGGGCATGACGTGTGCGGCGTGTGTGAATTCTGTTGAAGGGATTCTGAGGAGTCTCACGGGAGTAAAAAGAGCAGTGGTGGCTTTGGCTACTTCGTTAGGTGAAGTTGAGTATGATCCAAACGTGATTAGCAAAGATGATATTGTTACTGCAATCGAAGATGCTGGTTTTGAAGCTTCGTTTGTGCAGAGTAGTGGGCAGGATAAGATTGTTTTGGGGGTTGTTGGTGTGTACTCTTTGGCTGATGCTCGGGTTTTGGAAGGCATGCTTAGTGGTATTAAAGGGGTGAGACAGTTTCGGTTTGACTCGTCGTTGAGCGAACTGGATGTGGGGTTTGATCCTGAAGTTATCAGTTCTAGGTCTTTAGTTGATGTGATCCACTTGGGAAGCAATGGCAAGTTTAAATTGCATGTTAGAAATCCTTATACTAGAATGGCTTCTAAAGATGGTTCAGAAACCTCAGCTATGTTTCGGCATTTTACTTCCAGCTTGTTTCTCAGTATTCCTTTATTCTTCATGGGGGTAATTTGTCCCCACATACCATTGGTGTACTCCTTGTTGCTTTGGAGATGTGGGCCTTTTCTCATGGGTGATTGGCTGAAGTGGGCATTGGTCAGTGTCATCCAATTTGTAATTGGGAAACGTTTCTACATGGCCGCTGGCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACGGCCTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCCCTTACAGGATTTTGGTCTCCAACGTACTTTGAAACAAGTGCTATGCTCATAACATTTGTGTTGTTGGGCAAGTATTTGGAGTGCCTTGCCAAGGGAAAGACATCCGATGCCATTAAGAAGTTAGTGGAACTTACCCCTGCAACAGCTTTACTGGTCATCAAAGATAAAGGGGGTAAAACTATTGAAGAAAGGGAAATAGAGTCATTGCTTGTTCAACCTGGTGACACATTGAAAGTTCTTCCTGGTGCAAAGATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGTGAATCTATACCTGTTTCGAAGGAGGTCAATGCATCTGTTATTGGAGGTACAATCAATTTGCATGGTGTCCTTCACATTCAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAGTTTGGTGGAGACAGCCCAAATGTCTAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGCATATTTGTCCCTACTGTTGTGATTTTGTCATTATTGACGCTCTTTTGTTGGTATATTGCTGGGGCTCTTGGAGCTTACCCAGAAGAATGGCTGCCAGAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTTCAATATCTGTTGTGGTGATTGCATGTCCGTGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTGTTAATTAAAGGGGGAGATTCTTTGGAAAGGGCTCAGATGGTGAAGTACGTTATATTTGATAAAACAGGCACTCTAACACAGGGGAAAGCCACTGTTACTTCTGCCAAGGTGTTCACAGGAATGGACCGTGGAGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTGGCGAAAGCAATATTGCAATATGCACACCATTTTCATTTCTTTGATGAGTCTTCTACCGGTGGTACCCAGAATGATGCCAAAGAGTTAAAGCCAGGGTGGCTTTATGATGTCTCAGGCTTCTCTGCTCTTCCAGGAAGGGGTGTCCAGTGCTTTATAGATGGGAAGCGTGTTTTGGTTGGCAACCGGAAGATGCTGTTGGAAAGTGGCATAAATATTTCTACCGAAGTGGAAAATTTTGTTGTGGAGCTTGAAGAAAGTGCAAAGACAGGGATACTAGTAGCATATGATGATGTATTAACAGGTGTCTTAGGGGTTGCAGATCCTCTAAAGAGGGAAGCTTCTGTCGTTATAGAGGGCCTCCAGAAAATGGGAGTAATACCTGTTATGGTTACAGGAGACAACTGGAGAACAGCTCGAGCTGTTGCTAAGGAGGTTGGCATTCAAGATGTAAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTCCAAAAAGATGGAAGTATAGTAGCAATGGTGGGTGATGGTATCAATGATTCTCCTGCATTAGCTGCTGCTGATGTTGGTATGGCAATTGGGGCTGGAACAGATGTTGCAATAGAAGCTGCTAACTATGTGCTCATGAGAGATAACTTGGAAGATGTGATCACTGCCATTGATCTTTCCAGAAAAACCTTTTCTCGTATTCGATTGAATTACGTTTTTGCGATGGCCTACAATGTCATTGCTATACCAGTTGCTGCTGGGGTTTTATTTCCTTCGTTGGGGATCAAGCTGCCACCATGGCTTGCTGGTGCTTGCATGGCACTCTCGTCTGTTAGTGTTGTATGTTCTTCTTTACTTCTAAGAAGATATAGAAAACCCAAACTTACTACAATACTTGAAATAGTTGTAAATTAA 2988 0.4511 MAPSIGDLQLTSPGAGEDSDDLEDVRLLDSYDKNDVVVDGDTKRIQVRITGMTCAACSNSVEAALKSVNGVVDASVALLQHKAEVVFKPSLVKDEDIKNAIEDAGFEAEILPEPVSMGAKANGGPVVVGQFTIGGMTCAACVNSVEGILRSLTGVKRAVVALATSLGEVEYDPNVISKDDIVTAIEDAGFEASFVQSSGQDKIVLGVVGVYSLADARVLEGMLSGIKGVRQFRFDSSLSELDVGFDPEVISSRSLVDVIHLGSNGKFKLHVRNPYTRMASKDGSETSAMFRHFTSSLFLSIPLFFMGVICPHIPLVYSLLLWRCGPFLMGDWLKWALVSVIQFVIGKRFYMAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVIKDKGGKTIEEREIESLLVQPGDTLKVLPGAKIPADGIVTWGSSYVNESMVTGESIPVSKEVNASVIGGTINLHGVLHIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVILSLLTLFCWYIAGALGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDSLERAQMVKYVIFDKTGTLTQGKATVTSAKVFTGMDRGEFLTLVASAEASSEHPLAKAILQYAHHFHFFDESSTGGTQNDAKELKPGWLYDVSGFSALPGRGVQCFIDGKRVLVGNRKMLLESGINISTEVENFVVELEESAKTGILVAYDDVLTGVLGVADPLKREASVVIEGLQKMGVIPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANYVLMRDNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVIAIPVAAGVLFPSLGIKLPPWLAGACMALSSVSVVCSSLLLRRYRKPKLTTILEIVVN* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2127 995 CDD HMA 46 109 IPR006121 GO:0046872
Apr3g2127 995 ProSitePatterns Heavy-metal-associated domain. 133 162 IPR017969 GO:0046872
Apr3g2127 995 ProSiteProfiles Heavy-metal-associated domain profile. 128 194 IPR006121 GO:0046872
Apr3g2127 995 Gene3D - 749 800 IPR023299 GO:0000166
Apr3g2127 995 Gene3D - 657 748 IPR023299 GO:0000166
Apr3g2127 995 Gene3D - 418 540 - -
Apr3g2127 995 PANTHER ATP7, ISOFORM B 4 988 - -
Apr3g2127 995 Pfam haloacid dehalogenase-like hydrolase 646 883 - -
Apr3g2127 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 748 953 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g2127 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 671 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g2127 995 SFLD p-type atpase 632 921 IPR044492 -
Apr3g2127 995 MobiDBLite consensus disorder prediction 1 21 - -
Apr3g2127 995 SUPERFAMILY HMA, heavy metal-associated domain 38 112 IPR036163 GO:0046872
Apr3g2127 995 ProSiteProfiles Heavy-metal-associated domain profile. 44 110 IPR006121 GO:0046872
Apr3g2127 995 SUPERFAMILY Calcium ATPase, transduction domain A 451 536 IPR008250 -
Apr3g2127 995 SUPERFAMILY HMA, heavy metal-associated domain 128 198 IPR036163 GO:0046872
Apr3g2127 995 TIGRFAM TIGR00003: copper ion binding protein 45 108 IPR006122 GO:0005507
Apr3g2127 995 TIGRFAM TIGR00003: copper ion binding protein 130 192 IPR006122 GO:0005507
Apr3g2127 995 CDD HMA 130 193 IPR006121 GO:0046872
Apr3g2127 995 ProSitePatterns Heavy-metal-associated domain. 49 79 IPR017969 GO:0046872
Apr3g2127 995 CDD P-type_ATPase_Cu-like 291 965 - -
Apr3g2127 995 Pfam E1-E2 ATPase 431 629 - -
Apr3g2127 995 SFLD C1.7: P-type atpase like 632 921 - -
Apr3g2127 995 Gene3D - 129 194 - -
Apr3g2127 995 Gene3D - 617 926 IPR023214 -
Apr3g2127 995 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 364 978 IPR027256 GO:0006812|GO:0016021|GO:0019829
Apr3g2127 995 PANTHER HEAVY METAL P-TYPE ATPASE 4 988 - -
Apr3g2127 995 SUPERFAMILY HAD-like 649 975 IPR036412 -
Apr3g2127 995 Gene3D - 42 113 - -
Apr3g2127 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 387 959 IPR023298 -
Apr3g2127 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 652 658 IPR018303 -
Apr3g2127 995 PRINTS P-type cation-transporting ATPase superfamily signature 486 500 - -
Apr3g2127 995 PRINTS P-type cation-transporting ATPase superfamily signature 650 664 - -
Apr3g2127 995 PRINTS P-type cation-transporting ATPase superfamily signature 794 805 - -
Apr3g2127 995 PRINTS P-type cation-transporting ATPase superfamily signature 816 826 - -
Apr3g2127 995 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Apr3g2127 995 PRINTS P-type cation-transporting ATPase superfamily signature 892 904 - -
Apr3g2127 995 PRINTS H+-transporting ATPase (proton pump) signature 841 857 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g2127 995 PRINTS H+-transporting ATPase (proton pump) signature 869 885 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g2127 995 PRINTS H+-transporting ATPase (proton pump) signature 900 925 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g2127 995 Pfam Heavy-metal-associated domain 131 191 IPR006121 GO:0046872
Apr3g2127 995 Pfam Heavy-metal-associated domain 47 107 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2127 Apr-Chr3 37206735 37212044 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2127 3 37206735 37212044 Apr3g2127 3 37206735 37212044 ECH