Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1621 ATGGGAATACCTGATAGTTCAGTACTAGATCTAATAGAAAAGTTTAGGTCTTGGGTTTCTTGGGGAGGAAGTGATTTGTGTTTGTCTGAAAATTTTGATATGCTCAATAGTGGCTGCAAAATGTGTTGTGAGTGTAATAGAGATTTCAATGAGATGGGTCAACAGGACAAGTACAATTGCAAAGGCTGTGGCCGTTGGTTGTGTGGGAAATGTATCCGAGGTTGTGATCTCACAAATCATGAACACAATAACAATCCTGGATTCAGGGAAACCGTTCGTTCCTGCAAGTTCTGTTCAGATGCCAATAGGATGATGATTGAGGGTCAGAGGAAGTGTAGTGAGAAAGTGCACCCTTCTGTCTCTCCACAAGAGAGTCCAAGACAAAGTCCTGAGCCACCTTCCCCATGTTTTAGTGTTGAAAGTGAAAGAACCAGTTCTCCACTGAATATTGAATTGAATCAGGGAAATCAATTTGAGCGCTATTTTCACAACCAAGATTATGGATATTATCCTTGTTCAGTTGTCAACAGGAGTATGACCTCATCTGGTTCTCACCCTTCTCTTTTATCTACTCATCCATCAACCTTTAGGAGTGACGAAGAAGGGACAGAGGATTCTGGGAAGCACTTTCTCAGCCCATCACGTACATATTGTGATAATTATTCAGATATAGATTCAAGTAGGGTTAGTGCTAGACATGACACTTACAACTATAATTCTGTGGGGTCAAGTCCTTCAGAGAGCCCTTCTAGGATTGGTTTTACTTCTAGTAGGGTTGGGCTTCCTGTACAAAAGGGGCAGGAGAAAAGTCTCGTCCCTCAGAATGATGGTCCCTTTGGTCAACAAAGTATGGCTGTTTTAAGAAAGCCTGAACAAGGGACTGAGGATGCATATACTACTGGTTATTTTTCTGATGACTTGTCTATTTTCCGGAACCAGAATGATAATTCACAGAGGCCATTGGATTTTGAAAACAATGGTCTTATTTGGTTCCCCCCACCGCCTGATGATGAAAATGATGATGCAGAAGGCAATTTTTTTACATACGATGATGAGGATGATGATATTGGTGACTCAGGTGCCATGTTCTCATCCAGTAGCAGTCTATCTAATATGTTTCCTGGAAAGGAAAAACATAATGAGGGAAACAAGGAACCTTTAAAAGCTGTCATACAAGGGCATTTTAGAGCTCTTGTTTCACAGCTTTTAGAGGGAGAGGGTATTACAATTGGTAAGGAAAATGATTCTGAGGATTGGCTTGACATAGTTGCAACAGTAGCATGGCAGGCTGCTAACTTTGTGAGACCAGATACCAGCAAAGGTGGCAGTATGGATCCTGGTGATTATGTAAAGGTCAAATGCATAGCATCTGGAAGCCCAAGTGAAAGTGCTGTTATCAAAGGAGTGGTTTGTACAAAAAATATTAAGCATAAGCGCATGACCTCTCAATATAAAAAGCCTCGGCTACTTCTTTTAGGAGGAGCACTGGAATATCAGAAAGTTCCAAATCAACTGGCTTCTTTTGATACATTGTTGCAGCAGGAAAATGATCATCTGAAGATGATCATTTCAAAAATTGAGGCTCTTCGACCAAATGTTTTGCTGGTAGAAAAAAGTGTAGCTTCATGTGCTCAGGAATATTTGCTGGCAAAGGAAATCTCCTTGGTGTTGAATGTTAAAAGGCCTTTGCTGGACCGTATAGCTCGCTGCACCGGTGCTCTTGTCACTCCATCGGTGGATAATTTATCTAAAGCACGATTAGGGCATTGTGAATTGTTCCGGTTAGACAGATTGGTGGAGGATCATGAGACTGCTAATCAATTCAATAAAAAGCCATCCAAAACATTAATGTTTTTTGAAGGTTGTCCACGGCGTTTGGGTTGCACGGTCTTACTGAGGGGCACATGCCGTGCAGAACTAAAGAAAATTAAGCATGTTGTGCAATATGCTGTTTTTGCAGCCTATCACTTATCTCTTGAGACGTCATTCCTTGCTGATGAGGGTGCTACCCTACCTAAAATGATAGTAAAACACTTGACTGACATGCCTGAGAGTGCAACTGTTGACACAGACATTCCTATGATGTCTAACACCATTTCTATTTCATCAGCCACGTGCCAACCAGAAGCTGAGGATGCTTCTAGATTGAAAGACTCTGTTGGTCTTGATTTGAAGCTTGAAAATTTAGGATCAGCATCAGAGCATCTTGATGACCTTAGTTCTCATTCATGTACTGGCACCATGGCAAATTATAGGGATGGGAGTGCACTTTCTGATTCATACTATAATCATTTAACTTCTAATTTGACTGTAAAATCAGAATATTTGCCCCAGTACAATGAATCTAAGGGGGATACTATATTAAGTTCAAGCGACCTTTTGCAATCAGAATTGCAACAGACCATAGTTCAAGAGGAGAGGGAGTGTGGTGAAGTGGCTGACTCAACAAAAGACAGAACTAATGACGATGAGCTTTCTGGTGATTACTTCTCTGCCACTGATGGTCATCAAAGCATATTGGTGTACTTTTCCAGTCATTGTGTATCGAAAGGAACTGTATGTGAGCGTACTAGGTTGCTGCGCATAAAATTCTATGGCTCTTTTGATAAGCCTCTTGGGAGATATCTTCGTGATGATCTGTTTGATCAGACATCTTGCTGTCAATCTTGTAAAGAGCCAGCAGAGGCTCATGTCCTTTGTTTTACTCACCAGCAAGGAAATCTCACAATCAATGTTAGGCGCCTTCCGTCTGTGAAGTTGCCAGGAGAAAGAGATGGCAAGATTTGGATGTGGCACAGGTGTCTGAGGTGCCCTCATGTGGATGGAGTTCCACCAGCAACTCGGAGAGTTGTTATGTCGGATGCCGCCTGGGGTTTATCTTTTGGAAAGTTCTTGGAACTTAGCTTTTCAAACCATGCAACAGCAAACCGAGTTGCAACCTGTGGACATTCTTTGCAGAGGGATTGCCTCCGTTTTTATGGGTTTGGGAGCATGGTTGCATTCTTCCGGTATTCCCCTATTGATATTCTTTCTGTCCATCTACCCCCATCTGTGCTGGAATTTGGTCACGTCCAAGAGGAGTGGATTATAAAGGAGGCAGGAGAGCTTTTAAGTAAAGTGGAAACCTTGTATTTGGAGATATCAAATGTGTTGAAAAGGTTGGAAACAAAGATTGTGTCTCCTGTTGCTGGAAATGAGCTGTCTGATGCCTGTGACATTCATAACCACATAATGGATCTGAAAGATATGCTTCAAAGAGAAAGAGCTGATTATCATGGTTTGCTACAATCAGCCCCATTGACCCCACAACCAGGGAAGATAACGTTAGACATTCTGGAACTAAATCGTGTGCGGCGTTCTCTTCTTATTGGGTCACACGTTTGGGATCACCGGCTATACTCATTGGAGTCTCTCATTAAAAGAAGTTTTAGTTTTAAACAAGACAATGAAGTATGTCCTGATGTTAAAGAATTTAGACTTGACACATTCCACAAGGATCAGAATTTTGACAATGGGCTTGAGCAAAATAATTCTCAGCTTTCAAAATTGCATGAGTCTCATGACAGTCAAATACTTGGAGAGATGGATGACACACTTGAACCTAGTGCTTCCGAGTCATTTACATATTATCTTGATGGAGAGGAAGTATATTCAGATGGGGAACTTATTGCCAACAAAACATTATCTGAGTGTCTCCCACCAAATGAGTCCAATCTTTCTGAGAAAATAGATTCTGCATGGACTGGAACTGATCAACCTCCATTGAAAGTTGAACCACTTCATACATTTCAAGCAAATGCTGTCCCATCTGGAAGTGTTTGGCGTTCTAATCATGATAACCCTTCTTTTAGAAGGTTGTCACAACCAATGCGAGTTCATTCTTTTGATTCAGCATTAAGGGTTCAGGAAAGAATAAAAAAAGTCTTGCCTTCATCTTTACATTTATCAACACTTAGATCTTTTCATGCTTCTGGAGATTACAGGAATATGGTTAGAGACCCTGTCTCTAATGTACTGCAAACTTACTTTCAAATGTTGCCGTGGGAGGCACAGAAACTAAATTTGATTCTAAGCTCCCCGCCATCTTTTGTTTCCTCCATTTCTCACATAGCTGAAGGTGCTCGGTTGCTGCTTCCCCAAAGATATCATGGTGATAGAGTTATTGCTGTTTATGACAATGATTACTCTAGCATAATATCCTATGCCCTTAGTTCCAAGGAGTATGAAGATTGGGTTTCTGGTAAGTCAGATCTGCATGATAGTAGCTGGATTGCTTGTGATAAAACCAAAGAAGATTTAGCTACTTCCAGCTATTCTGCATGGGGTACTATGGAGTTGGACTACATCAATTTTGGCAGTTATGGGTCTGAAGATGCACCATCTTCTGTTGGTTCTCTTCTCAGGGACCCCAAAAAATCTTTACACTTACAAATTTCTTTTGGGGATGATTCATTGGGTGCTGGAGGTAAAGTGAATTTCTCTGTCACTTGCTATTTTGCGAAGCAGTTTGAATCACTTAGGAAAAAGTGCTGCCCTAATGAGGTTGATTTCATGCGATCCTTGAGCCGTTGTCGGAGATGGAGTGCACAAGGAGGCAAAAGTAATGTATATTTTGCCAAGTCATTAGATGAAAGGTTTATTATTAAACAAGTGACTAAGACAGAGTTGGATTCCTTTGAAGAATTTGCACCTCAGTATTTCAAATACCTGATGGATGCCCTTAGTTCAGGAGGCCCAACTTGCCTTGCCAAAATTCTTGGTATTTATCAGGTCACTGTCAAATACCCAAAAGGTGGCAAGGAAACAAAAATAGATGTGATGGTAATGGAGAATCTCTTTTACAAGAGAAAAATATCGAGGGTATATGATCTCAAGGGCTCAGAAAGATCAAGGTATAATCCAGATACAACCGGGACAAACAAAGTTATGCTAGACATGAATTTGTTAGAAGCATTGAGAACAAAACCCATATTTCTTGGGAGTAGGGCTAAGAGAAGACTCGAAAGAGCCGTGTGGAATGACACATCCTTTTTGGCGTCTGTTGATGTTATGGACTATTCATTGTTGGTTGGAGTGGATGATGAACGCAAGGAACTGGTTTTGGGCATCATTGATTTCATGAGACAGTACACATGGGACAAGCATTTGGAAACATGGGTGAAGGCTTCTGGGATACTTGGGGGTCCAAAGAATGCTGCCCCTACAATAGTTTCTCCTAAACAATACAAGAAAAGGTTTAGGAAAGCTATGACTACCTATTTTCTCACATTACCTGAGCAGTGGTCATCATGA 5292 0.411 MGIPDSSVLDLIEKFRSWVSWGGSDLCLSENFDMLNSGCKMCCECNRDFNEMGQQDKYNCKGCGRWLCGKCIRGCDLTNHEHNNNPGFRETVRSCKFCSDANRMMIEGQRKCSEKVHPSVSPQESPRQSPEPPSPCFSVESERTSSPLNIELNQGNQFERYFHNQDYGYYPCSVVNRSMTSSGSHPSLLSTHPSTFRSDEEGTEDSGKHFLSPSRTYCDNYSDIDSSRVSARHDTYNYNSVGSSPSESPSRIGFTSSRVGLPVQKGQEKSLVPQNDGPFGQQSMAVLRKPEQGTEDAYTTGYFSDDLSIFRNQNDNSQRPLDFENNGLIWFPPPPDDENDDAEGNFFTYDDEDDDIGDSGAMFSSSSSLSNMFPGKEKHNEGNKEPLKAVIQGHFRALVSQLLEGEGITIGKENDSEDWLDIVATVAWQAANFVRPDTSKGGSMDPGDYVKVKCIASGSPSESAVIKGVVCTKNIKHKRMTSQYKKPRLLLLGGALEYQKVPNQLASFDTLLQQENDHLKMIISKIEALRPNVLLVEKSVASCAQEYLLAKEISLVLNVKRPLLDRIARCTGALVTPSVDNLSKARLGHCELFRLDRLVEDHETANQFNKKPSKTLMFFEGCPRRLGCTVLLRGTCRAELKKIKHVVQYAVFAAYHLSLETSFLADEGATLPKMIVKHLTDMPESATVDTDIPMMSNTISISSATCQPEAEDASRLKDSVGLDLKLENLGSASEHLDDLSSHSCTGTMANYRDGSALSDSYYNHLTSNLTVKSEYLPQYNESKGDTILSSSDLLQSELQQTIVQEERECGEVADSTKDRTNDDELSGDYFSATDGHQSILVYFSSHCVSKGTVCERTRLLRIKFYGSFDKPLGRYLRDDLFDQTSCCQSCKEPAEAHVLCFTHQQGNLTINVRRLPSVKLPGERDGKIWMWHRCLRCPHVDGVPPATRRVVMSDAAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRFYGFGSMVAFFRYSPIDILSVHLPPSVLEFGHVQEEWIIKEAGELLSKVETLYLEISNVLKRLETKIVSPVAGNELSDACDIHNHIMDLKDMLQRERADYHGLLQSAPLTPQPGKITLDILELNRVRRSLLIGSHVWDHRLYSLESLIKRSFSFKQDNEVCPDVKEFRLDTFHKDQNFDNGLEQNNSQLSKLHESHDSQILGEMDDTLEPSASESFTYYLDGEEVYSDGELIANKTLSECLPPNESNLSEKIDSAWTGTDQPPLKVEPLHTFQANAVPSGSVWRSNHDNPSFRRLSQPMRVHSFDSALRVQERIKKVLPSSLHLSTLRSFHASGDYRNMVRDPVSNVLQTYFQMLPWEAQKLNLILSSPPSFVSSISHIAEGARLLLPQRYHGDRVIAVYDNDYSSIISYALSSKEYEDWVSGKSDLHDSSWIACDKTKEDLATSSYSAWGTMELDYINFGSYGSEDAPSSVGSLLRDPKKSLHLQISFGDDSLGAGGKVNFSVTCYFAKQFESLRKKCCPNEVDFMRSLSRCRRWSAQGGKSNVYFAKSLDERFIIKQVTKTELDSFEEFAPQYFKYLMDALSSGGPTCLAKILGIYQVTVKYPKGGKETKIDVMVMENLFYKRKISRVYDLKGSERSRYNPDTTGTNKVMLDMNLLEALRTKPIFLGSRAKRRLERAVWNDTSFLASVDVMDYSLLVGVDDERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTIVSPKQYKKRFRKAMTTYFLTLPEQWSS* 1764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1621 1763 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1434 1754 IPR002498 GO:0016307|GO:0046488
Apr3g1621 1763 Gene3D - 1612 1755 - -
Apr3g1621 1763 SMART PIPK_2 1466 1755 IPR002498 GO:0016307|GO:0046488
Apr3g1621 1763 CDD Fab1_TCP 396 668 - -
Apr3g1621 1763 MobiDBLite consensus disorder prediction 112 143 - -
Apr3g1621 1763 SUPERFAMILY SAICAR synthase-like 1485 1754 - -
Apr3g1621 1763 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1467 1611 IPR027484 -
Apr3g1621 1763 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1530 1696 IPR002498 GO:0016307|GO:0046488
Apr3g1621 1763 MobiDBLite consensus disorder prediction 181 196 - -
Apr3g1621 1763 CDD PIPKc_PIKfyve 1491 1754 IPR044769 GO:0000285
Apr3g1621 1763 Pfam TCP-1/cpn60 chaperonin family 416 665 IPR002423 GO:0005524
Apr3g1621 1763 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1760 - -
Apr3g1621 1763 CDD FYVE_like_SF 41 98 - -
Apr3g1621 1763 MobiDBLite consensus disorder prediction 181 215 - -
Apr3g1621 1763 Gene3D GroEL 461 634 IPR027409 -
Apr3g1621 1763 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1C-RELATED 1 1760 - -
Apr3g1621 1763 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 103 IPR017455 -
Apr3g1621 1763 SUPERFAMILY GroEL apical domain-like 462 634 IPR027409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1621 Apr-Chr3 31639355 31647381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1621 1 1763 Acyl Lipid Metabolism Gene Families AT1G71010 53.914 0.0 1746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1621 3 31639355 31647381 Apr3g1621 3 31639355 31647381 ECH
Apr9g2421 9 31622410 31634317 Apr3g1621 3 31639355 31647381 PCT