Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1603 ATGGCGACAACCACCCACCTCTCCTTTACCCTTTTATTCCTCAGCATCTTTCATTTCCTCCTCTCAGCTTCGCTAGAACTTGCTTCTGAAAAAACTCCTACATTCCCCAAACAAGCCCTTCCTACCAAATCTGGTTACCTCCCAGTTACCCCCACTTCTGCTTCTGCAATTTTCTACACTTTCTATGAAGCCCAAAACTCAACTTCTCCTCTTTCTCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCCGGTTGCTCCTCCATGATTGGCAACTTCTACGAGCTTGGACCCTGGCGTGTCACCAAATCCCTTACCCTTCACCCCAACCCTGGTGCTTGGAACAGAATTTTTGGCCTTCTTTTTCTTGATAATCCAATTGGAACTGGCTTCAGTGTTGCCTCCACGCCAGAAGAAATTCCAACCGATCAAAGCACCGTTGCTAAACACCTTTTTGCTGCTATAACAAGGTTCATTCAACTTGATCCTGTTTTCAAGAACCGTCCTATTTATATTACAGGGGAAAGCTATGCTGGCAAGTATGTACCTGCAATTGGGTATTATATATTGCAGAAAAATGCAAACTTGAAGGTTTCTGAAAGAGTGAATTTGGCTGGTGTGGCAATTGGTGATGGGTTAACCGATCCTGTAGCCCAAGTGGTCACTCATGCTGCCAATGCTTACTATGTTGGGTTGATCAATGAGAGGCAAAAGAATGAATTGGAGAAAGCTCAATTGGAAGCAGTTAGAATGGCCCAGAAGGGGAATTGGAGTGAAGCAACAGATGCGAGGAACGAAGTCTTGGACATGTTACAAAACATGTCGGGGTTGGCTACTTTGTATGACTATACAAGGAAAGAACCTTATCAAAGTGATTTGGTTGAGCAGTTCTTGAACATCACTGAGGTGAAGAAGGCCTTGGGAGTCAACGAATCATTTGTATATGAGATATGCAGTGATATTGTTGGGGCTGCATTACATGCTGACGTAATGAAAAGTGTGAAATATATGGTGGAGCACTTGGTAAGGAAGACTAGGGTGTTGTTGTATCAAGGTCAGTACGATGTGCAGGATGGTGTGGTCCAAGCAGAGGCATGGGTGAAGACAATGAAATGGGAAGGGATTGTGGAGTATCTGAATGCTGAAAGGAAGATATGGAAAGTAAATGGAGAGCTTGCAGGGTATGTACAAAATTGGAAGTCACTCACCAATGTTGTAGTTTTGGGGGCTGGCCATGTTTTGCCTACTGACCAACCTCTGAATTCTCTGGCAATGATAGAAGATTGGGTTTTGGAAAGGGGTGAGTTTAAGGGTTTGGAGGATGAAAAGGTATCGAGAAAGTGTATACTTGTTATGTAA 1359 0.44 MATTTHLSFTLLFLSIFHFLLSASLELASEKTPTFPKQALPTKSGYLPVTPTSASAIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIGNFYELGPWRVTKSLTLHPNPGAWNRIFGLLFLDNPIGTGFSVASTPEEIPTDQSTVAKHLFAAITRFIQLDPVFKNRPIYITGESYAGKYVPAIGYYILQKNANLKVSERVNLAGVAIGDGLTDPVAQVVTHAANAYYVGLINERQKNELEKAQLEAVRMAQKGNWSEATDARNEVLDMLQNMSGLATLYDYTRKEPYQSDLVEQFLNITEVKKALGVNESFVYEICSDIVGAALHADVMKSVKYMVEHLVRKTRVLLYQGQYDVQDGVVQAEAWVKTMKWEGIVEYLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHVLPTDQPLNSLAMIEDWVLERGEFKGLEDEKVSRKCILVM* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1603 452 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 438 IPR001563 GO:0004185|GO:0006508
Apr3g1603 452 Coils Coil 234 254 - -
Apr3g1603 452 Pfam Serine carboxypeptidase 39 430 IPR001563 GO:0004185|GO:0006508
Apr3g1603 452 PANTHER CARBOXYPEPTIDASE 31 438 - -
Apr3g1603 452 Gene3D alpha/beta hydrolase 22 439 IPR029058 -
Apr3g1603 452 SUPERFAMILY alpha/beta-Hydrolases 41 430 IPR029058 -
Apr3g1603 452 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Apr3g1603 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Apr3g1603 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Apr3g1603 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Apr3g1603 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1603 Apr-Chr3 31344021 31345479 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1603 293 430 Calmodulin-binding Proteins AT2G22960 20.863 9.56e-09 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1603 3 31344021 31345479 Apr3g1603 3 31344021 31345479 ECH