Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1599 ATGGAGTCAGCCACGCACAACTCCCTTATCAAAAACCTTGTGGCTATCTTCTTCTGCTTTTGTTTCTCTGTATGTCCTTTCTTATTAGTTTCGGCTTCTTCACCATCATATGCTTCAAAATTAACCCTTCCATTCCCCAAACAAGCCCTCCCCACCAAATCTGGTTATCTCCCAATCGGTTCGACTTCCAATTCTGCAATTTTCTACACTTTCTACGAAGCTCAAAACTCCCCTTCACCTCTCTCCCGAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGTTGCTCCTCCATGATTGGCAACTTCTACGAGCTTGGACCCTGGCGTGTCACCAAATCTCTTACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATTTTTGGCCTTCTTTTCCTTGATAGTCCCATTGGAACTGGCTTTAGTATCGCCTCAACGCCACAAGAAATCCCAATTGATCAAAACGCTGTTGCCAAGCACTTATTTGCTGCTATAACAAGGTTTGTTCAACTTGGTCCTGTTTTCAAGAATCGTCCTATTTATATTACTGGGGAAAGCTATGCTGGTAAGTATGTACCTGCAATTGGGTATTATATTTTGCAGAAAAATGCAAACTTGGACATTTCTGAAAGAGTGAATTTGGCTGGTGTGGCAATTGGGGATGGGTTGACTGACCCTGTAAGCCAAGTGGTTACTCATGCTGCCAATGCTTACTATGTTGGGTTGATCAATGAGAGGCAGAAGAATGAGTTGGAGAAAGCTCAATTGGAAGCAGTTGGATTGGCCCAGAAGGGGAATTGGAGTGAAGCAACAAATGCGAGGAATGAAGTCTTGCACATGTTACAAAACATGACAGGGTTAGCTACTTTGTATGACTATACAAGGAAAGAACCTTATCAAAGTGATTTGGTTGAGCAGTTCTTGAACATCACTGAGGTGAAGAAGGCCTTGGGAGTCAACGAATCATTTGTATATGAGATATGCAGTGATGTTGTTGGGGCTGCATTACATGCTGACGTAATGAAAAGTGTGAAATATATGGTGGAGCACTTGGTAACGAAGACTAGGGTGTTGTTGTATCAAGGTCAGTACGATGTGCAGGATGGTGTGGTCCAAGCAGAGGCATGGGTGAAGACAATGAAATGGGAAGGGATTGTGGAGTATCTGAATGCTGAAAGGAAGATATGGAAGGTAAATGGAGAGCTTGCAGGGTATGTACAAAACTGGAAGTCACTCACCAATGTTGTGGTTTTGGGGGCAGGGCATCTTTTGCCTACTGATCTGGCGGTTAATTCTCAAGCAATGATAGAAGACTGGGTTTTGGAAAGGGGTTTGTTTAAAAGTGTGGGGAGGATGGAAACAAAGACTATGCTTGTTATGTAA 1383 0.4375 MESATHNSLIKNLVAIFFCFCFSVCPFLLVSASSPSYASKLTLPFPKQALPTKSGYLPIGSTSNSAIFYTFYEAQNSPSPLSRTPLLIWLQGGPGCSSMIGNFYELGPWRVTKSLTLQPNPGAWNRIFGLLFLDSPIGTGFSIASTPQEIPIDQNAVAKHLFAAITRFVQLGPVFKNRPIYITGESYAGKYVPAIGYYILQKNANLDISERVNLAGVAIGDGLTDPVSQVVTHAANAYYVGLINERQKNELEKAQLEAVGLAQKGNWSEATNARNEVLHMLQNMTGLATLYDYTRKEPYQSDLVEQFLNITEVKKALGVNESFVYEICSDVVGAALHADVMKSVKYMVEHLVTKTRVLLYQGQYDVQDGVVQAEAWVKTMKWEGIVEYLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDLAVNSQAMIEDWVLERGLFKSVGRMETKTMLVM* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1599 460 Coils Coil 244 264 - -
Apr3g1599 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Apr3g1599 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Apr3g1599 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Apr3g1599 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 412 425 IPR001563 GO:0004185|GO:0006508
Apr3g1599 460 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Apr3g1599 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 447 IPR001563 GO:0004185|GO:0006508
Apr3g1599 460 Gene3D alpha/beta hydrolase 33 448 IPR029058 -
Apr3g1599 460 SUPERFAMILY alpha/beta-Hydrolases 50 440 IPR029058 -
Apr3g1599 460 PANTHER CARBOXYPEPTIDASE 38 447 - -
Apr3g1599 460 Pfam Serine carboxypeptidase 50 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1599 Apr-Chr3 31281540 31289455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1599 303 440 Calmodulin-binding Proteins AT2G22960 20.863 2.47e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1599 3 31281540 31289455 Apr3g1599 3 31281540 31289455 ECH