Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1597 ATGGGGAAAAAACAAATCCCAGACCCTCCTAATTTGAAGAAATTCGGTGTTCCATTCTATTCTGTTGCTTGGATTCCCCAACACGTTATCAAATCACGCCAATTTGAAACCGCTGATCAATCCTCCGATGCCGATCACAACTCTGCACCGGCGACGGAGACAGAGCCCGCCACAGCGGAATTGTCCGGCGGTAACTATCTCGTGTTCGCCGGCGGTGGTGGAGAAGGCCGCAGCGGTATCCCCAATGCTGTGTTGCTTGGGCACTTCGATGTTGCATCGAATACTCTCGCTGACCAACCGGTGTGCAAGGTAGGAACTGATTCTGAATTGCCTTATAGGATGGCACTTCACCCCAATGGAGATGGCCTTATTTGTGCAATGGAAACACCTAAGATTTGCAGATGGTTTGACTGGGAACAAAACAAGAGTTCTGCAATTCATAAGTGGGGTTTGAAATTGTCAGAGAAAGTGCTCACCCAGTTTGAGGATGTTGGACAGCAATTAGCATTGGCATTCAACAATGATGGTACTGCACTAGCTGCTGGTGGGGAGGATGGCAGTCTAAGAGTTTTCAAGTGGCCTAGCATGGAAATTATTCTCAATGAGTCTAATGCTCATTCTTCTGTGAAGGACTTACATTTCAGTTCTGATGGTAAATTGCTTGTCTCTTTGGGAAGCAGTGGCCCCTGCAGGGTTTGGGATGTTTCTTCATCAATAGTCTTAGCTACTCTATCAAATGAAAATGGTGAAGTTTTCACCTCCTGCAGATTTTCTAAAATAAAGGATGGGACTCAGGTCCTATCTATTGCTGCCATGAAAGATAAAGATGGAATCATCCTGACCTGGAATACACAAACATGGGAAAGGATAGGCTCAAAGTATATTATTCGAGATGCAATATCTGCATTGAATGTCTCAGCTGATGGAAAGTTTCTTGCATGTGGAACACCTTCAGGAGACATTATAGTTGTAAATTCAACAAACATGCAGATTCATACAATGATCAAAAGGGCTCACCTTGGTATTGTAACTGCTTTAGCATTCTCCCCTGATTCAAGGGCCTTGGCTTCAGTATCCATGGATTCAAGTGCGAGGGTGACAATAATTGAAGAGAAGAAAAATGGAGCGCTGAGCTTGTGGATTGCCGTATTTATCATCCTACTTGCAGTAGCTGCTTACTTCTTGAAGCAAGGAATTGAAAAGTGA 1206 0.4428 MGKKQIPDPPNLKKFGVPFYSVAWIPQHVIKSRQFETADQSSDADHNSAPATETEPATAELSGGNYLVFAGGGGEGRSGIPNAVLLGHFDVASNTLADQPVCKVGTDSELPYRMALHPNGDGLICAMETPKICRWFDWEQNKSSAIHKWGLKLSEKVLTQFEDVGQQLALAFNNDGTALAAGGEDGSLRVFKWPSMEIILNESNAHSSVKDLHFSSDGKLLVSLGSSGPCRVWDVSSSIVLATLSNENGEVFTSCRFSKIKDGTQVLSIAAMKDKDGIILTWNTQTWERIGSKYIIRDAISALNVSADGKFLACGTPSGDIIVVNSTNMQIHTMIKRAHLGIVTALAFSPDSRALASVSMDSSARVTIIEEKKNGALSLWIAVFIILLAVAAYFLKQGIEK* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1597 401 Pfam WD domain, G-beta repeat 337 366 IPR001680 GO:0005515
Apr3g1597 401 Pfam WD domain, G-beta repeat 169 191 IPR001680 GO:0005515
Apr3g1597 401 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 366 IPR001680 GO:0005515
Apr3g1597 401 MobiDBLite consensus disorder prediction 35 59 - -
Apr3g1597 401 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 7 396 IPR045260 GO:0005085
Apr3g1597 401 Gene3D - 57 374 IPR015943 GO:0005515
Apr3g1597 401 PANTHER SEC12P-LIKE 2 PROTEIN-RELATED 7 396 - -
Apr3g1597 401 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 62 366 IPR011047 -
Apr3g1597 401 ProSiteProfiles Trp-Asp (WD) repeats profile. 202 243 IPR001680 GO:0005515
Apr3g1597 401 SMART WD40_4 154 192 IPR001680 GO:0005515
Apr3g1597 401 SMART WD40_4 327 368 IPR001680 GO:0005515
Apr3g1597 401 SMART WD40_4 286 325 IPR001680 GO:0005515
Apr3g1597 401 SMART WD40_4 196 234 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1597 143 315 Miscellaneous Gene Families AT5G08390 23.729 7.92e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1597 3 31170571 31186578 Apr3g1597 3 31170571 31186578 ECH