Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1594 ATGGACGAAGAAACAACCATGGAAGTGCACCGAGTTGTCCCACCACCCCACAAGAGCAACCTACATAAATTCAGGGCCAAGTTTAAGGAAACATTTTTCCCTGAAGATCCTCTGCGCCAATTTAAGGGACAACCTCCTAAGAAAAAACTAATCCTCGGAGCACAATATTTGTTCCCTGTGGTTCAATGGCTTCCTACTTACAGCTTCAAACTCTTTAAATCTGACCTTATTTCTGGTTTCACCATTGCTAGCTTAGCCATCCCTCAGGGAATCAGTTATGCCAAGCTTGCAAGTCTTCCTCCAATTGTGGGACTCTATTCTAGTTTTGTTCCCCCACTTGTGTATGTTGTTCTTGGAAGTTCAAGGGATCTTGCTGTGGGACCTGTTTCTATTGCTTCTCTTGTGTTGGGATCCATGCTCACACAGGAAGTGTCTCCCACTGCCGAGCCTGATTTGTTTCTTAAGTTAGCTTTTACTTCAACATTCTTTGCTGGTCTCTTTCAAGCTGCTCTAGGGATTCTAAGGTTAGGATTCATCATTGATTTTCTATCCAAGGCAATTCTTCTTGGATTCATGGCTGGAGCTGCTGTAATTGTGGCTCTGCAACAGCTCAAGAGCCTCTTTGGCATCACAAATTTCACTAAAAAGATGGCCATAATTCCTGTTATGAGTTCTGTTTTTCATAATATAGACGAGTGGTCATGGCAAACAATACTGATGGGGATGTGCTTCTTGGTGTTACTAATGGTAGCAAGACACATTAGCATGAGGAAGCCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTCATCATCTCTACCATCCTTGCATTTGTAATCAAGGCTCAACATCATGGCATCAGTGTGATTGGCAAATTGCAACAAGGAGTAAATCCTCCTTCTGCAAATATGTTACTCTTTCAAGGAACTCATCTAGGTCTAGTCATGAAAACTGGCATTATCACTGGCATTTTATCCCTCACGGAAGGAATTGCAGTGGGAAGGACATTTGCGGGTCTCAGAAACTACAAAATTGATGGAAACAAGGAAATGATAGCAATTGGGTTCATGAATGTGGTTGGCTCCACCACATCCTGCTATGTCACAACAGGATCTTTCTCTCGCTCAGCTGTGAATCATAACGCAGGTGCAAAAACAGCAATGTCAAACGTAGTAATGTCTGTGACAGTCTTGCTGACACTCCTGTTTGTGATGCCATTATTTCAATACACTCCTAATGTTATATTGGGCGCAATCATAATAACAGCAGTGATTGGCCTCATTGACATCCCTGCTGCTTATCTCATTTGGAAGATAGACAAATTTGATTTCGTTGTGATGTTGACTGCATTCTTTGGTGTGGTTTTCATCTCTGTCCAGTTCGGCCTTGCTGTTGCAGTAGCCTTGTCAATTTTGAGGATCCTCCTGCAAATTACAAGGCCTAAAACAGTAATGTTGGGGAACATACCAGCGACAAACATATATAGAAATCTTCATCATTATAAGGAAGCTACAAGAACACCTGGTTTTCTTATTTTAAGTATAGAGGCTCCCATCAATTTTGCAAACATCACATATCTCAATGAAAGGATATTGCGATGGGTAGAAGAAGAAGAAGCCACCATCAAGGAAAGATTATGCCTTCAATTTGTGATTCTGGAAATGTCAGCTGTGAGCGCTATAGACACAAGCGGAGTCTCACTTTTCAAGGAGTTGAAAACAGCATTGATATTGAAGAGTGTTGAGCTTGTGTTGGTGAATCCTCTAGCTGAGGTCATAGAAAAGCTGAAAAAAGCAGATGAAGCTAATGATTTCATTCGAGCAGAATACCTTTTCTTAACAGTTGGAGAGGCTGTAACTTCACTTTCGTTAGCAATGAAGGGCCAATCATCAACCATGGAAGAAGAGGTACAGACAATTGTGACTGAGTACTAA 1944 0.4177 MDEETTMEVHRVVPPPHKSNLHKFRAKFKETFFPEDPLRQFKGQPPKKKLILGAQYLFPVVQWLPTYSFKLFKSDLISGFTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYVVLGSSRDLAVGPVSIASLVLGSMLTQEVSPTAEPDLFLKLAFTSTFFAGLFQAALGILRLGFIIDFLSKAILLGFMAGAAVIVALQQLKSLFGITNFTKKMAIIPVMSSVFHNIDEWSWQTILMGMCFLVLLMVARHISMRKPKLFWVSAGAPLVSVIISTILAFVIKAQHHGISVIGKLQQGVNPPSANMLLFQGTHLGLVMKTGIITGILSLTEGIAVGRTFAGLRNYKIDGNKEMIAIGFMNVVGSTTSCYVTTGSFSRSAVNHNAGAKTAMSNVVMSVTVLLTLLFVMPLFQYTPNVILGAIIITAVIGLIDIPAAYLIWKIDKFDFVVMLTAFFGVVFISVQFGLAVAVALSILRILLQITRPKTVMLGNIPATNIYRNLHHYKEATRTPGFLILSIEAPINFANITYLNERILRWVEEEEATIKERLCLQFVILEMSAVSAIDTSGVSLFKELKTALILKSVELVLVNPLAEVIEKLKKADEANDFIRAEYLFLTVGEAVTSLSLAMKGQSSTMEEEVQTIVTEY* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1594 647 PANTHER BNAA09G30120D PROTEIN 8 628 IPR030313 -
Apr3g1594 647 Coils Coil 592 612 - -
Apr3g1594 647 Pfam Sulfate permease family 72 452 IPR011547 GO:0016021
Apr3g1594 647 Gene3D STAS domain 483 626 IPR036513 -
Apr3g1594 647 PANTHER SULFATE TRANSPORTER 8 628 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr3g1594 647 CDD STAS_SulP_like_sulfate_transporter 504 618 - -
Apr3g1594 647 Pfam STAS domain 504 621 IPR002645 -
Apr3g1594 647 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Apr3g1594 647 ProSiteProfiles STAS domain profile. 503 625 IPR002645 -
Apr3g1594 647 TIGRFAM sulP: sulfate permease 59 621 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr3g1594 647 SUPERFAMILY SpoIIaa-like 508 625 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1594 Apr-Chr3 31129939 31140298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1594 4 632 Inorganic Solute Cotransporters AT3G15990 64.818 0.0 832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1594 3 31129939 31140298 Apr3g1594 3 31129939 31140298 ECH