Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1585 ATGGCAGCTTCTACTTCTCCAAACTTCTCAACATCTTTGTACAATAATACCCAGAAAACAAATTTTCCATCTTCACTCGGAAAGAATAAGTCTTTGCAGACCCAATTTGGTTTCTCATTTTCTGTGCCATTCAACAAATCCATACGTGTGAAATCCTATGGCACTGCTAAGTATGATGAAGTAGTGGTGGATGAAGAACTGGACAAGATTAGGAGGCTTCAGAATGGTTCAGATGTTAGAGGAGTGGCATTGGAAGGTGAGAAAGGTAGAACAGTTGACCTTACTCCACCAGCTGTGGAAGCAATATCAGAGAGTTTTGGGGAGTGGGTCATCAATGGTTTAGAAAAGGAAAGGGGACACCCTGTAGAGAATGTGAGAGTGTCTCTTGGTCGTGACCCTCGTATTTCGGGGTCAAAGTTGAGTGTGACGGTGTTTTCAGGTCTTTCTCGTGCTGGTTGCATGGTGTTTGATATGGGACTAGCCACCACACCAGCTTGTTTCATGAGCACATTGTTGCCTCCATTTGTCTATGATGCTTCAATAATGATGACAGCTTCTCACTTGCCTTATACCCGTAATGGTCTGAAATTTTTTACGAAGAGAGGGGGATTGACTTCGACGGAGGTGGAAGAAATATGTGACAAAGCTGCTCGCAAATATGCAAATAGGATGGCCAAAGTGTCTACCATGCTTAGTGTTCTTCCAGCAAGAGTTGATTTCATGAGCACTTATGCAAAGCACCTACGAGAAATCATCAAAGAGAGGATCAATCATCCTTTTCATTATGACACTCCACTCCAGGGATTTCAGATAATAGTAAATGCTGGAAACGGCTCAGGAGGCTTCTTCACATGGGATGTGCTGGATAAACTTGGTGCAGATACCTTTGGCTCTCTGCATCTTAATCCTGATGGGATGTTTCCTAATCACATTCCAAACCCTGAGGATAAAACTGCCATGGCACTGACAACGGCTGCAGTTTTAGAAAATTCAGCTGATCTTGGAATAGTTTTTGATACTGATGTGGACAGAAGTGGAGTGGTTGATAACAAAGGGAACCCAATAAATGGTGACAAGCTTATTGCTCTCATGTCAGCAATTGTATTGAGGGAATATCCAGGATCAACTATAGTCACCGATGCTCGTACAAGTATGGCACTTAATAGATTTATAACTGATAGAGGGGGTCAACATTGCCTATATCGTGTTGGTTATAGAAATGTCATTGACAAGGGAGCACAACTTAACAAGGATGGAATTGAAACCCATCTTATGATGGAAACATCTGGTCATGGTGCTCTCAAAGAAAATCATTTCCTTGATGATGGAGCTTACATGGTGGTGAAAATTATAATTGAAATGGTACGAATGAAGCTTGCGGGATCAGATGAAGGGATTGGTAGTCTTATAAAAGATCTTGAAGAGCCATATGAATCGATAGAACTTCGGATAAATATCATCTCCCAACCTCGACATGCTAAAGCTAAAGGATCAGAGGCGATTGAAACATTTAGAAACTACATTGAGGAAGGGAGGCTTAAAGGGTGGGAGTTAGACTCATGTGGTGACTGTTGGGTGAGTGAAGGGTGCCTTGTAGATACAAATGACACCCCGGCTCCCATTGATGCTCGCATGTACAGGGCAAAAGTATCAAATGATGAGCATGGACAACATGGTTGGGTTCACATGCGACAGAGTATACACAACCCAAACATTGCTGTGAACCTGCAATCATCTGTTCATGGAGGGTGTTTGTCCATGGCAAGAGCTTTTAGAGATGAGTTTCTCATAACAAGTGGAGTTCATACATTCCTGGATATTACTCAAGTTGATAAGTTTGCTGAAAATGGCTCCGTGGCCTAA 1863 0.4235 MAASTSPNFSTSLYNNTQKTNFPSSLGKNKSLQTQFGFSFSVPFNKSIRVKSYGTAKYDEVVVDEELDKIRRLQNGSDVRGVALEGEKGRTVDLTPPAVEAISESFGEWVINGLEKERGHPVENVRVSLGRDPRISGSKLSVTVFSGLSRAGCMVFDMGLATTPACFMSTLLPPFVYDASIMMTASHLPYTRNGLKFFTKRGGLTSTEVEEICDKAARKYANRMAKVSTMLSVLPARVDFMSTYAKHLREIIKERINHPFHYDTPLQGFQIIVNAGNGSGGFFTWDVLDKLGADTFGSLHLNPDGMFPNHIPNPEDKTAMALTTAAVLENSADLGIVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLREYPGSTIVTDARTSMALNRFITDRGGQHCLYRVGYRNVIDKGAQLNKDGIETHLMMETSGHGALKENHFLDDGAYMVVKIIIEMVRMKLAGSDEGIGSLIKDLEEPYESIELRINIISQPRHAKAKGSEAIETFRNYIEEGRLKGWELDSCGDCWVSEGCLVDTNDTPAPIDARMYRAKVSNDEHGQHGWVHMRQSIHNPNIAVNLQSSVHGGCLSMARAFRDEFLITSGVHTFLDITQVDKFAENGSVA* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1585 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 356 457 IPR016055 GO:0005975|GO:0016868
Apr3g1585 620 Gene3D - 349 472 - -
Apr3g1585 620 Gene3D - 74 230 - -
Apr3g1585 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 179 193 IPR005841 GO:0005975|GO:0016868
Apr3g1585 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 268 287 IPR005841 GO:0005975|GO:0016868
Apr3g1585 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 303 316 IPR005841 GO:0005975|GO:0016868
Apr3g1585 620 PRINTS Phosphoglucomutase/phosphomannomutase family signature 332 347 IPR005841 GO:0005975|GO:0016868
Apr3g1585 620 PANTHER OS06G0476200 PROTEIN 13 618 - -
Apr3g1585 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 77 252 IPR016055 GO:0005975|GO:0016868
Apr3g1585 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 356 456 IPR005846 GO:0005975|GO:0016868
Apr3g1585 620 Gene3D - 270 348 - -
Apr3g1585 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 72 221 IPR005844 GO:0005975|GO:0016868
Apr3g1585 620 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 244 352 IPR005845 GO:0005975
Apr3g1585 620 PANTHER PHOSPHOHEXOSE MUTASE 13 618 - -
Apr3g1585 620 SUPERFAMILY Phosphoglucomutase, first 3 domains 243 354 IPR016055 GO:0005975|GO:0016868
Apr3g1585 620 CDD PMM_PGM 73 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1585 Apr-Chr3 30977607 30981301 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1585 3 30977607 30981301 Apr3g1585 3 30977607 30981301 ECH