Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1584 ATGGAGAACGTTCTGGGTCTTATCAAGCTTCGTGTGAAAAGAGGCACAAATCTCGTAGCTCGCGATTCACGTACCAGTGACCCATATGTTGTTGTTACCATGGCTGAACAGAAATTGAAGACTGGTGTTGTGAAAGATAGCTGCAATCCTGAGTGGAATGAAGAATTGACACTTTATGTAAGGGATGTTAACATTCCTGTACTTCTGACAGTTTCAGACAAAGACACTTTCACCGTGGATGACAACATGGGCGATGCAGATATAGACTTAAAACCATATCTTCATTGTGTTAAGATGGACCTGAACGGTCTCCCAGATGGGCATGTAGTCAGGATGGTTCAACCAAATAGGACTAATTGTCTTGCAGAGGAGAGCAACTGCATATGGAAAAATGGAAGAGTCATTCAAGAGATGAGTTTAAGATTGAGAAATGTTGAGTCTGGGGAAATAACCCTGGAAATTGAGTGGGTTAATATTCCTGATTCCAAGGGCTTATCAGAAATTGAGTTTTAG 513 0.4133 MENVLGLIKLRVKRGTNLVARDSRTSDPYVVVTMAEQKLKTGVVKDSCNPEWNEELTLYVRDVNIPVLLTVSDKDTFTVDDNMGDADIDLKPYLHCVKMDLNGLPDGHVVRMVQPNRTNCLAEESNCIWKNGRVIQEMSLRLRNVESGEITLEIEWVNIPDSKGLSEIEF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1584 170 Pfam C2 domain 7 92 IPR000008 -
Apr3g1584 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 170 IPR044562 -
Apr3g1584 170 Gene3D C2 domain 4 164 IPR035892 -
Apr3g1584 170 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 170 - -
Apr3g1584 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Apr3g1584 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Apr3g1584 170 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1584 Apr-Chr3 30972708 30974491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1584 38 166 C2H2 Transcription Factor Family AT1G70790 54.198 1.27e-49 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1584 3 30972708 30974491 Apr3g1584 3 30972708 30974491 ECH
Apr3g1584 3 30972708 30974491 Apr6g0995 6 14594883 14597076 ECH