Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1570 ATGGCTTGCAGGCAGTTGTGGGCTTCAAGAGCTGCGTCCTACCTCAGGATCTCTATCTTCCACAGAGGCTTTTCGAATGTTGTTAAAGATTTGAAGTATGCTGATTCTCATGAGTGGGTAAAAGTTGATGGAAATTCCGCAACCGTTGGGATAACGGATCATGCCCAAGATCATTTGGGTGATGTTGTATATGTTGAATTGCCAGAAGTGGGAGTGAAAGTAACACAAGGAGGTAGTTTTGGTGCAGTTGAAAGTGTGAAGGCTACTAGTGATATTAACTCTCCTGTTTCAGGAAAAGTGGTTGAAGTCAATGAAGAGCTTAACAGCTCTCCGGCTTTGGTCAACTCAAGCCCTTATGAAGATGGATGGATAATTAAGGTTGAGATGAGTGAGAGTGGTGAGCTAAACAACTTGATGGATTCAGAGAAGTACTCCAAGTTCTGTGAAGAAGAAGATTCCAAGCATTGA 468 0.4274 MACRQLWASRAASYLRISIFHRGFSNVVKDLKYADSHEWVKVDGNSATVGITDHAQDHLGDVVYVELPEVGVKVTQGGSFGAVESVKATSDINSPVSGKVVEVNEELNSSPALVNSSPYEDGWIIKVEMSESGELNNLMDSEKYSKFCEEEDSKH* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1570 155 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 4 153 IPR002930 GO:0005960|GO:0019464
Apr3g1570 155 Gene3D - 19 151 - -
Apr3g1570 155 TIGRFAM gcvH: glycine cleavage system H protein 28 152 IPR017453 GO:0005960|GO:0019464
Apr3g1570 155 Hamap Glycine cleavage system H protein [gcvH]. 28 149 IPR002930 GO:0005960|GO:0019464
Apr3g1570 155 SUPERFAMILY Single hybrid motif 27 150 IPR011053 -
Apr3g1570 155 CDD GCS_H 33 127 IPR033753 -
Apr3g1570 155 ProSiteProfiles Biotinyl/lipoyl domain profile. 46 128 IPR000089 -
Apr3g1570 155 Pfam Glycine cleavage H-protein 31 150 IPR033753 -
Apr3g1570 155 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 71 100 IPR003016 -
Apr3g1570 155 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 4 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1570 Apr-Chr3 30744694 30747555 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1570 3 30744694 30747555 Apr3g1570 3 30744694 30747555 ECH