Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1569 ATGGCTTGTAGGCAGTTATGGGCTTCAAGAGCTGCATCCTATCTAAGGATCTCTGTCTTTCACAGAAGCTTCTCTAATGGTAATCTTCTTCTTCTTCTCTCCGTGATCTGCTTTTCGTCAGTTTTGAAAGAGCTGAAGTATGCTGATTCTCATGAGTGGGTGAAAGTTGATGGAAATTCTGCAACTGTTGGCATAACTGACCACGCCCAAGATCACTTGGGTGATGTTGTGTACGTTGAATTGCCCGAGGTGGGAGCAACCGTAGCACAAGGAGAAGGCTTTGGTGCAGTTGAAAGTGTGAAGGCAACTAGTGATGTTAACTCTCCTGTTTCAGGAAAAGTAGTTGAAGTTAATGAAGAGCTTAACAGTGCTCCTGCATTGGTCAACTCAAGCCCTTATGAAAATGGATGGATAATTAAAGTTGAAATGAGTGACAGTGGTGAACTAAACAACTTGATGGATTCAGAAAAGTACACCAAGTTCTGTGAAGAAGAAGATTCCAAGCACTGA 510 0.4255 MACRQLWASRAASYLRISVFHRSFSNGNLLLLLSVICFSSVLKELKYADSHEWVKVDGNSATVGITDHAQDHLGDVVYVELPEVGATVAQGEGFGAVESVKATSDVNSPVSGKVVEVNEELNSAPALVNSSPYENGWIIKVEMSDSGELNNLMDSEKYTKFCEEEDSKH* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1569 169 Pfam Glycine cleavage H-protein 45 164 IPR033753 -
Apr3g1569 169 TIGRFAM gcvH: glycine cleavage system H protein 43 166 IPR017453 GO:0005960|GO:0019464
Apr3g1569 169 SUPERFAMILY Single hybrid motif 41 164 IPR011053 -
Apr3g1569 169 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 85 114 IPR003016 -
Apr3g1569 169 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 4 167 IPR002930 GO:0005960|GO:0019464
Apr3g1569 169 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 4 167 - -
Apr3g1569 169 ProSiteProfiles Biotinyl/lipoyl domain profile. 60 142 IPR000089 -
Apr3g1569 169 CDD GCS_H 47 141 IPR033753 -
Apr3g1569 169 Hamap Glycine cleavage system H protein [gcvH]. 42 163 IPR002930 GO:0005960|GO:0019464
Apr3g1569 169 Gene3D - 36 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1569 Apr-Chr3 30735449 30739095 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1569 3 30735449 30739095 Apr3g1569 3 30735449 30739095 ECH