Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1554 ATGGAAGAGAACAAAGAGCAAATTGTGGATGTTGGATCCGTGGTTGAAGCTGTTTCTGCTGATGACGGTGATGCCCCTCTTTACAACCTCGAAAGTCTTTGCATGCGTTGTGGTGAAAATGGGATTACAAGATTTTTATTGACTTTGATTCCTCACTTCAGAAAGATTTTGTTGTCAGCTTTTGAATGTCCTCACTGCGGTGAGAGGAACAACGAAGTACAGTTTGCTGGTGAAATTCAACCACGGGGTTGTTCCTACTCGTTGGAGATCCCATTAGGCGAACCGAAGATGCTAAATCGACAAGTGGTAAAATCAGAATCTGCTACCATTAAGATACCAGAACTGGATTTTGAGATTCCACCTGAGGCTCAGCGTGGTAGTTTGTCAACGGTGGAAGGGATACTTATGAGAGCTGCTGATGAACTTCAGGCTCTTCAAGAGGAACGCAGAAAAGTGGCTCCAGAGACAGCAGAAGCAATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCAACAGGACAATCATCCTTAACATTTATTCTTGATGATCCTGCAGGAAACAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCACTGACTATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTAGTTGATTCCACACAGATCGAAGGGACTCATGATGAAGCACCAGAAGGGGGAGAAGACGTGACTGCTGATCAAGCAAGGAGAGAACCACATGGATCAATAGGAGCAGCTGCTGGTCAACGTGCCATTGCGCAGAGTAATGGTGCAGATATTGCTGAGGCCTTATTTCGATATACTTCCCCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGCTTGTACTGCCAGGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTAATTGTCATGGCATCCACATGCGATTCTTGTGGTTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCCGAGAAAGGAAAAAGAATTACTCTCTGTGTGAAGAATGTAAATGACCTGAGCCGCGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCTGAACTTGAGTTGGAACTGGCAAGCGGCACCTTGGGAGGAATTGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTCACTTTTGGAGATAGTCTTGATGAACATAGAAGGAGCAAGTGGCTAGACTTTAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTTAAAGATGACAATCAATTAGCATTTGAGGAATATGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGATACCTCTTCTGCCGATGTTGCTTATGAATCAACAAATACTGCTAAAACTGAGTAA 1494 0.4304 MEENKEQIVDVGSVVEAVSADDGDAPLYNLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCSYSLEIPLGEPKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERRKVAPETAEAIDQFLVKLRACATGQSSLTFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQASLGYLVDSTQIEGTHDEAPEGGEDVTADQARREPHGSIGAAAGQRAIAQSNGADIAEALFRYTSPEEVMTFPSTCGACTARCETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRIPEKGKRITLCVKNVNDLSRDVIKSDTASVKVPELELELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDEHRRSKWLDFKARLNKLLSLEEAWTLILDDALANSFVAPATDDLKDDNQLAFEEYERSWEQNEELGLNDMDTSSADVAYESTNTAKTE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1554 497 Gene3D ZPR1, A/B domain 78 219 IPR042451 -
Apr3g1554 497 Gene3D ZPR1, A/B domain 334 476 IPR042451 -
Apr3g1554 497 Pfam ZPR1 zinc-finger domain 288 446 IPR004457 GO:0008270
Apr3g1554 497 Pfam ZPR1 zinc-finger domain 32 191 IPR004457 GO:0008270
Apr3g1554 497 Gene3D ZPR1, zinc finger domain 278 333 IPR042452 -
Apr3g1554 497 Gene3D ZPR1, zinc finger domain 24 77 IPR042452 -
Apr3g1554 497 PANTHER ZINC FINGER PROTEIN ZPR1 5 490 IPR040141 -
Apr3g1554 497 Coils Coil 128 148 - -
Apr3g1554 497 MobiDBLite consensus disorder prediction 473 497 - -
Apr3g1554 497 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 5 490 - -
Apr3g1554 497 MobiDBLite consensus disorder prediction 474 497 - -
Apr3g1554 497 SMART zpr1 32 192 IPR004457 GO:0008270
Apr3g1554 497 SMART zpr1 288 448 IPR004457 GO:0008270
Apr3g1554 497 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 289 480 IPR004457 GO:0008270
Apr3g1554 497 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 34 216 IPR004457 GO:0008270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1554 3 30508699 30520344 Apr3g1554 3 30508699 30520344 ECH