Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1524 ATGGACTCGCAACGACGAACAACCCCTTCTCCTCCGTCTCCGCAACTCCATGAATCAACCTCCATCTTCTTGCCCTTCCTCGCATTCTTCACCATTGCCGCTCTGGTTGTGGTTCCTTCAGCATCACCATCTTTCAAAAATACCTTATCCATTCTGCACCAAGTTCCTGAAGGCCATGTAGGGGTATATTGGAGAGGGGGTGCCCTTCTGAAAACAATTACAGAGCCAGGTTTTCATCTAAAGATGCCTTTCGTAACTGAGTATGAACCCGTTCAAGTGACACTTCAGACAGATCAGGTGACTGATATACCATGTGGTACTAAAGGAGGTGTTATGATAAATTTTGAAAAGATTGAGGTTGTTAACCGACTTCACAAGGAATATGTCTTTGAGACACTTCTCAACTATGGTGTGCATTATGACAAGACATGGATATATGACAAGATTCATCATGAGATCAATCAGTTCTGCAGCTCCCATTCTCTTCAACAAGTTTATATTGATGTGTTTGATCAGATTGATGAAAAGATGAAAGATGCTCTTCAAGTTGACTGCACCCGTTATGCTCCAGGAATTGAGATCATCAGTGTCCGTGTCACAAAGCCAACAATTCCAGAAAGCATAAGACGCAACTTTGAACAAATGGAAGAGGAGCGTACTAAGGTCTTAATTGCTATTGAGAAACAGAAAGTATCTGAGAAGGAGGCAGAGACTATGAAGAAGATGGCCATTAGTGAGGCTGAAAAGAATGCCAATGTTAGCAAGATCCTAATGGAACAAAAATTGTTGGAAAAGGATAGTGCAAGAAGACAAGAAGAAATTGAGAATGAAATGTACCTGGCACGTGAAAAGAGCCTGGCAGATGCAGACTTCTACCGTGTTATAAAGGAAGCTGAAGCAAACAGGTTGAAGCTTACTCCTGAATTTCTCCAGCTTAAATTTATCGAGGCCATCGCTAATAATACGAAGATTTTCTTCGGGGACAAGGTTCCGAATATGATTTTGGATCAGAGGCTGCTTGGAAACTTCCTTCATGAAGTTTCTAGAGGGACAGCTACAAAGGACAAAACAGATATCTGA 1080 0.4176 MDSQRRTTPSPPSPQLHESTSIFLPFLAFFTIAALVVVPSASPSFKNTLSILHQVPEGHVGVYWRGGALLKTITEPGFHLKMPFVTEYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLHKEYVFETLLNYGVHYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPESIRRNFEQMEEERTKVLIAIEKQKVSEKEAETMKKMAISEAEKNANVSKILMEQKLLEKDSARRQEEIENEMYLAREKSLADADFYRVIKEAEANRLKLTPEFLQLKFIEAIANNTKIFFGDKVPNMILDQRLLGNFLHEVSRGTATKDKTDI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1524 359 SMART PHB_4 50 216 IPR001107 -
Apr3g1524 359 SUPERFAMILY Band 7/SPFH domain 82 219 IPR036013 -
Apr3g1524 359 CDD SPFH_like_u3 50 337 IPR033294 GO:0005783|GO:0031625
Apr3g1524 359 Pfam SPFH domain / Band 7 family 54 236 IPR001107 -
Apr3g1524 359 PANTHER ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG 20 351 IPR033294 GO:0005783|GO:0031625
Apr3g1524 359 PANTHER ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG 20 351 - -
Apr3g1524 359 Gene3D Band 7 domain 79 217 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1524 Apr-Chr3 30045767 30049067 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1524 3 30045767 30049067 Apr3g1524 3 30045767 30049067 ECH