Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1521 ATGTCCTCGGAGAAGGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTTCTGAGCAGGCTGAGAGATATGATGAAATGGTTGAATGCATGAAGAAGGTAGCAAAACTTGATCTAGAGCTAACAGTGGAAGAGAGGAACCTGCTGTCGGTGGGATATAAAAATGTGATTGGTGCACGGAGAGCCTCTTGGCGCATTATGTCTTCAATTGAACAGAAAGAAGAGTCCAAGGGAAATGAGAACAATGCAAAACTGATAAAGAATTACCGCCAAAAGGTGGAAGACGAACTATCCAAAATTTGCAGTGACATTCTTACAATTATTGACAAGCATCTCGTTCCTTCTTCCACCTCTGGAGAAGCTACCGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGACCAAGAAAGGAAGGAGGCAGCAGAGCAGTCACTAAAGGGATATGAGGCTGCTTCAGCCACTGCCAACACAGATCTTCCATCAACACATCCAATTCGTCTTGGACTTGCACTCAATTTCTCAGTCTTTTATTATGAGATAATGAACTCCCCTGAAAGGGCCTGTCACTTGGCTAAACAAGCTTTCGATGAGGCAATTGCGGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAATTGTTGAGAGATAACTTGACTCTCTGGACCTCCGATTTACCTGAGGATGGAGGTGACGAAATCAAAACAGAAGAAGCCAAACCTGCTGAAACTGAGGTACGTGTATGA 783 0.4355 MSSEKERETQVYLAKLSEQAERYDEMVECMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNAKLIKNYRQKVEDELSKICSDILTIIDKHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKTEEAKPAETEVRV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1521 260 Coils Coil 13 33 - -
Apr3g1521 260 MobiDBLite consensus disorder prediction 240 260 - -
Apr3g1521 260 Coils Coil 195 215 - -
Apr3g1521 260 SMART 1433_4 7 248 IPR023410 -
Apr3g1521 260 PANTHER BNAC03G57490D PROTEIN 3 250 - -
Apr3g1521 260 MobiDBLite consensus disorder prediction 239 260 - -
Apr3g1521 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Apr3g1521 260 Gene3D - 1 247 IPR036815 -
Apr3g1521 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Apr3g1521 260 Pfam 14-3-3 protein 13 235 IPR023410 -
Apr3g1521 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Apr3g1521 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Apr3g1521 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Apr3g1521 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Apr3g1521 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Apr3g1521 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Apr3g1521 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Apr3g1521 260 PIRSF 14-3-3 1 247 IPR000308 -
Apr3g1521 260 PANTHER 14-3-3 PROTEIN 3 250 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1521 Apr-Chr3 30006763 30010207 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1521 3 30006763 30010207 Apr3g1521 3 30006763 30010207 ECH
Apr3g1521 3 30006763 30010207 Apr7g1415 7 21259223 21262990 PCT