Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1516 ATGTTAATGTTTTATTTTTCACAAAATTTACCCCAGGAGCTCACAGTTATCTTCATCAAATGCCTTTATTTATGTGGTCATATGTTCTGTTTCATTATTAACTCTTATTTATTGTATTACAGAATCAGAATGGGATATAAGAGATGTCTTGAGGCCAATGAATTTGATGATCTTTCTTTGAACAAGGCAAAGCGTTTTGAATGCAGCAGTGAACTGGTTTCATTTGCTGATATTGTTACACCCAACAATGCCTTTTTAAAGACTGTTATTTCAGGGGATGATGAAGATGGCTTTTACAATGTTCAATGGTATGATCCACCTGAAACAGACACTGGCAAGGAATCTCCATATGCTGGTGACAAGAATGTTCAAACCAGTGGCCTCTTCAGCAGCTGTTCTAGTGAGGATGACACCAGTTCTGGTGCAACATCATTATCCTCTGCTTCCTCGGATTGTTTGGAATTTGATATTCCACAGAGAGCATTTGTTCCTTTGGATGATGACTATGTGGACTATGATTGCTCACCTAGAAAACCAGTTCCCATTGGGCCAAATCATCAAGCCACTATTCCTGTTTGGAGAGGAAAAGTGAATAAGATGTCAGGGTTAGGCATATATAATCATGATAGTCCCTCCTCTGGTTTGGTATCAGTTCAAACTGTTGATGAAGATGAAGAGAGACTCATGGGAACTTCAGTGCTCGCAATGGATGAGTCTTACTTTTATTCTTCTGCTAATAACAAGAGTTGGCAAGACAGGACAGAGTGTAAGTGCCTGGATCAGGGCTCGATCAGATGTGTTAGGCTGCATGTTAAAGAAGCACGTGGAAATTTGAGGGAGATTCTTGGGAAGGAAAATTTTGTGAACTTGGGCTTTAGGAACATGGGAGAGGATGTTGCACAGGAATGGACTGAAGAAGAAGAGGACATGTTTCATGAGGTTGTCTACAGCAATCCTGCATCATTGGGTAGAAACTTCTGGAAATACTTGTCTGTTGCATTTCCTTCTCGAAGCAACAAGGAAATTGTCAGCTACTACTTTAATGTCTTTATGCTGCGGAGAAGAGCTGCTCAGAACAGGTCTAGATTTTTGGATATTGATAGTGATGATGATGAATGTCATACAAGAAATGGGATTTTTGGTTATGAAAATTCAGAAGATGATTCTGCCATTGAATCTCTTGGTGATCAAGATGTCCATGTAGAAAATCAAGATAATTATTCTGATGAAGATGATGGTGATGATAACAGTGATGATGAAGCTGCTGGCAATGTTCTTGGTTTAACTGGAATAAATATGGGAAACACCACTGAGGTGGAGGGAGGGCTTGGTCAAAGATCATCAAAATGCAAGGTGAACTCACAGAGTGAAACTTGGAGTAATCCTGTTCAACATTTCAATGGGACTTCAGGGATTCTGAAGGATGATATTGGGGTCCAGGATGACTCCTGTATGTCCTTTGAGTGTAATACCAATATGGATGTGTCTTGCCATGGTTTAGTAGATGCTAGCTCTGCTCTGCAAGCTAGGGGATTTAAATACGATCAGAGTCCACGCGTGCATTTGTCCGGCAATGAGATGGAGCATGTTTATTTGATGGAGCCCTGTGATGCTAAAGACTGGTATCCTGGTGGGTACTCAACAAGTTCGAGCACCGATATTGACTTCTTACCTACATCCAATTTGATCGAAGAGTTTTTCGGTCATGGTACTTCAGATAAAAAGAACAGAAGTGATTGA 1740 0.4034 MLMFYFSQNLPQELTVIFIKCLYLCGHMFCFIINSYLLYYRIRMGYKRCLEANEFDDLSLNKAKRFECSSELVSFADIVTPNNAFLKTVISGDDEDGFYNVQWYDPPETDTGKESPYAGDKNVQTSGLFSSCSSEDDTSSGATSLSSASSDCLEFDIPQRAFVPLDDDYVDYDCSPRKPVPIGPNHQATIPVWRGKVNKMSGLGIYNHDSPSSGLVSVQTVDEDEERLMGTSVLAMDESYFYSSANNKSWQDRTECKCLDQGSIRCVRLHVKEARGNLREILGKENFVNLGFRNMGEDVAQEWTEEEEDMFHEVVYSNPASLGRNFWKYLSVAFPSRSNKEIVSYYFNVFMLRRRAAQNRSRFLDIDSDDDECHTRNGIFGYENSEDDSAIESLGDQDVHVENQDNYSDEDDGDDNSDDEAAGNVLGLTGINMGNTTEVEGGLGQRSSKCKVNSQSETWSNPVQHFNGTSGILKDDIGVQDDSCMSFECNTNMDVSCHGLVDASSALQARGFKYDQSPRVHLSGNEMEHVYLMEPCDAKDWYPGGYSTSSSTDIDFLPTSNLIEEFFGHGTSDKKNRSD* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1516 579 CDD SANT 302 350 IPR001005 -
Apr3g1516 579 Gene3D - 303 363 - -
Apr3g1516 579 PANTHER BNAA08G19780D PROTEIN 44 577 - -
Apr3g1516 579 MobiDBLite consensus disorder prediction 403 433 - -
Apr3g1516 579 PANTHER DNA BINDING PROTEIN 44 577 - -
Apr3g1516 579 SUPERFAMILY Homeodomain-like 301 350 IPR009057 -
Apr3g1516 579 ProSiteProfiles Myb-like domain profile. 303 350 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1516 Apr-Chr3 29947577 29951088 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1516 3 29947577 29951088 Apr3g1516 3 29947577 29951088 ECH