Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1513 ATGGCTGCTCTACCCTTCTCAACAACCTGCAGCCATTCCAAGTTACCTATACATCGCAATTCCAAATCAAGCTTCGCAGGTTTCAGTCCAAGAAACAGTATTTGGCAGTTGTTTGTAATCACCAAGTCAAATTCCAGAAGGGCAATAAGAAAACTGTGCGTGAAGAATGTTGCCAGTGACAAGAAGCAGGAAATGAAAGAACCACTCAATGAACAAGGCACTTTCAATGAATTTGTACCAGATTCTGCATCTATTGCTTCTAGCATCAAATTCCATGCTGAGTTCACCACCCCTTTTTCTCCAGAGAAGTTTGAGCTCAATAAGGCTTTCTTTGCAACTGCAGAGAGTGTTCGTGATTCTCTTATCATAAATTGGAATGCAACAAATGACTATTACGAGCGAATGAATGTTAAGCAAGCCTATTATATGTCTATGGAGTATCTACAGGGTAGGGCATTGCTAAATGCAATTGGGAATTTACAACTCTCGGGTCCTTATGCTGAGGCTCTCAAAAAGCTGGGTCACAACTTGGAGGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGAATGGGGGATTAGGTCGGCTTGCTTCTTGCTTTCTGGACTCCTTGGCAACTTTGAATTACCCTGCATGGGGATATGGACTCAGATACAAGTATGGTTTATTCAAACAGCTTATAACAAAGAATGGACAGGAGGAAGTTGCTGAAAACTGGCTTGAGATGGGAAATCCATGGGAAATTTTGAGAAATGATGTTTCTTATCCAGTTAAATTCTATGGGGAAGTTAATTCAGGGCCAAATGGAAGTAAACAGTGGATTGGAGGAGAAAATATATTGGCTGTCGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACCACTATAAATCTGCGATTGTGGTCGACTAAAGTTTCTCCAGAAGAATTTGATTTGCAAGCCTTCAATTCTGGAGATCATGCCAAAGCATATGCTGCTATGAAGAAAGCAGAGAAGATCTGCTACATTCTGTACCCCGGTGATGAATCAATAGAAGGAAAAACTCTACGATTGAAGCAACAATACACACTATGTTCTGCCTCTCTCCAAGATATTGTTGCACGCTTTGAAAAGAGATCAGGGAAGAGAGTCAATTGGGATACTCTCCCAGATAAAGTGGTGGTACAAATGAATGATACTCATCCAACACTTTGCATTCCTGAGCTGATTAGGATATTGATGGATGTCAAGGGTTTAAGTTGGGAGAAAGCCTGGAATATTACTAAAAGAACGGTTGCTTACACAAACCACACAGTTCTACCAGAGGCACTAGAGAAATGGAGTTTGTCACTTCTGCAGGATTTACTTCCTCGACACGTGGAACTAATAAGAATGATAGATGAAGAGTTGATACATGAAATCATTGCCGAGTATGGTACAGATGATCTTGAATTGTTGGAACAAAGATTTAAAAAAATGAGAATACTGGAAAATATTGAATTGCCTAGCTCAGTGATGGAGCTGCTTAATATTCCAAAAGAGACTCCTGCTGTTGATCCTGTGGAGGAAATTGATGTTGATGATAATGATATAAAGGCAACAGAAGAACAGGAAAAAGAAGAACAAAAAGAAGAAGAAGAAGATGATGACGATGGTGATGATGAAGTAGGGAAAGAGGGGGAGGAGGAAGAAGAAGAAGAAACTGTTGTAGAGGATACTGGCAGTAAAATAGAAGTGAGATTCAAAGTTGATTCAAAACTACCAATGATGGTTCGCATGGCTAATCTATGTGTTGTTGGCGGGTTTTCTGTAAATGGGGTGGCCGAGATTCATAGTGAGATTGTAAAAGATGAAGTTTTTGATGAATTTTACAAGTTGTGGCCTGAGAAATTCCAGAATAAAACAAATGGGGTGACCCCTAGAAGATGGATTCGTTTCTGTAATCCTGATCTTAGTAAAATCATAACCAAGTGGATTGGAACAGAAGACTGGGTAACAGACCTTAAGAAATTGGCTATACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGATAGAATCAAAAAGAAGAAACAAAATAAAGGTTGCATCATTTCTCAAAGAGAAAACGGGTTATGTTGTCAATCCAAATGCAATGTTTGATGTGCAGGTGAAGCGCATTCATGAATACAAACGACAGTTACTGAATATCATGGGAATTGTTTATCGCTACAAGAAGATGAAAGAATTGAGTGCTAAGGAAAGAAAACAAATGGTTGTTCCTCGGGTTTGTATTTTTGGGGGGAAAGCATTTGCAACCTATGTCCAAGCCAAGAGGATTGTAAAATTCATCACAGATGTAGGGGCTACAATCAATCATGATCCAGAAATTGGTGATCTTTTGAAGGTTGTTTTTGTTCCTGATTACAATGTCAGTGTCGCTGAAATGCTAATTCCAGGCAGTGAGTTGTCCCAGCACATCAGCACTGCTGGGATGGAAGCCAGTGGGACAAGCAACATGAAATTTGCAATGAATGGATGCATACTTATAGGAACTCTTGATGGAGCGAATGTTGAAATAAGACAAGAGGTTGGAGAAGATAACTTCTTTCTTTTTGGTGCACGAGCTCAAGAAATTGCTGGGCTACGGAAAGAAAGAGCCGAGGGAAAGTTTGTACCAGAGCCACGGTTTGAAGAAGTTAAGGAATATGTAAGAAGTGGTGTTTTTGGACCCTACAATTATGAAGAATTGATGGGGTCGTTGGAAGGGAATGAAGGCTATGGTCGTGCTGATTATTTTCTTGTTGGCAAGGACTTCCCTAGCTACTTGGAGTGCCAAGAACAAGTTGATGAGGCATATCGTGATCAGAAGAGATGGACAAGAATGTCAATCTTGAACACAGCTGGTTCATACAAATTCAGCAGTGACAGGACTATACATGAATATGCTAGAGATATATGGAGAATTGAACCCGTTGAATTGGCTTGA 2961 0.4016 MAALPFSTTCSHSKLPIHRNSKSSFAGFSPRNSIWQLFVITKSNSRRAIRKLCVKNVASDKKQEMKEPLNEQGTFNEFVPDSASIASSIKFHAEFTTPFSPEKFELNKAFFATAESVRDSLIINWNATNDYYERMNVKQAYYMSMEYLQGRALLNAIGNLQLSGPYAEALKKLGHNLEDVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKNGQEEVAENWLEMGNPWEILRNDVSYPVKFYGEVNSGPNGSKQWIGGENILAVAYDVPIPGYKTRTTINLRLWSTKVSPEEFDLQAFNSGDHAKAYAAMKKAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIVARFEKRSGKRVNWDTLPDKVVVQMNDTHPTLCIPELIRILMDVKGLSWEKAWNITKRTVAYTNHTVLPEALEKWSLSLLQDLLPRHVELIRMIDEELIHEIIAEYGTDDLELLEQRFKKMRILENIELPSSVMELLNIPKETPAVDPVEEIDVDDNDIKATEEQEKEEQKEEEEDDDDGDDEVGKEGEEEEEEETVVEDTGSKIEVRFKVDSKLPMMVRMANLCVVGGFSVNGVAEIHSEIVKDEVFDEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDLKKLAILRKFADNEDLQLEWIESKRRNKIKVASFLKEKTGYVVNPNAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKELSAKERKQMVVPRVCIFGGKAFATYVQAKRIVKFITDVGATINHDPEIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEDNFFLFGARAQEIAGLRKERAEGKFVPEPRFEEVKEYVRSGVFGPYNYEELMGSLEGNEGYGRADYFLVGKDFPSYLECQEQVDEAYRDQKRWTRMSILNTAGSYKFSSDRTIHEYARDIWRIEPVELA* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1513 986 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 824 836 IPR035090 -
Apr3g1513 986 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 579 984 - -
Apr3g1513 986 PIRSF Glucan_phosphorylase_GlgP 81 492 IPR000811 GO:0005975|GO:0008184
Apr3g1513 986 PIRSF Glucan_phosphorylase_GlgP 526 986 IPR000811 GO:0005975|GO:0008184
Apr3g1513 986 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 578 980 IPR011833 GO:0004645|GO:0005975|GO:0030170
Apr3g1513 986 Coils Coil 524 544 - -
Apr3g1513 986 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 26 985 - -
Apr3g1513 986 PANTHER GLYCOGEN PHOSPHORYLASE 26 985 IPR000811 GO:0005975|GO:0008184
Apr3g1513 986 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 77 478 - -
Apr3g1513 986 Gene3D Glycogen Phosphorylase B; 80 519 - -
Apr3g1513 986 Gene3D Glycogen Phosphorylase B; 633 965 - -
Apr3g1513 986 CDD GT35_Glycogen_Phosphorylase 88 980 - -
Apr3g1513 986 Gene3D Glycogen Phosphorylase B; 579 981 - -
Apr3g1513 986 MobiDBLite consensus disorder prediction 511 568 - -
Apr3g1513 986 Pfam Carbohydrate phosphorylase 170 493 IPR000811 GO:0005975|GO:0008184
Apr3g1513 986 Pfam Carbohydrate phosphorylase 577 980 IPR000811 GO:0005975|GO:0008184
Apr3g1513 986 MobiDBLite consensus disorder prediction 535 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1513 Apr-Chr3 29913549 29923987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1513 3 29913549 29923987 Apr3g1513 3 29913549 29923987 ECH