Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0487 ATGATCAGCACAGTGTACGTAATGCTTGCTTCTTCTGAGACAGTTGCTGCATCTTTAGGGAACTCATACAAGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCCATTAATAAGCAAAGCGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACTTGAGAGAAGTCAAGTCATTACGAAAAATGAATCATCCAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTTCCTCGTTTTTGAGTACATGGAATGCAACCTCTACCAACTTATGAAAAACAGGGAAAAGCTGTTTTCTGAAGATGAGGTTAGAAATTGGTGTTTTCAAGTTTTCCAGGGTCTAGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTGAAGCCTGAAAACTTGCTGGTTACAAAGGACATCATCAAGGTTGCTGATTTTGGCCTTGCCCGAGAGATCAGTTCACAACCACCCTACACCGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCCCATCTGTACAGCTCTAAAGTTGACATTTGGGCTATGGGTGCTATCATGGCTGAGTTGTTCACTCTTCGTCCTCTATTTCCTGGTACCAGTGAAGCAGATGAGATATACAAAATATGCAGTGTGATAGGAAGTCCAACCACTGAATCTTGGGCAGATGGACTTAAACTTGCTAGGGATATAAACTATCAGTTTCCACAGCTTGCTAGCGTACATCTCTCTGTACTGATCCCATCCAGAAGTGATGATGCAATCAGCCTTATTACGTCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCAGCAGAGGCCCTACAACATCCTTTCTTTCAGAGTTGCTTTTATATCCCTCCATCCCTTCGCACTAGAGCTGTAACCAGAACTCCTCCATCTGTTGGAACCAGGGGATCCCTTGATCGGCAAGGGATCAAAAGATACTCTGGTGCTTTGCCTAATACAAAACTCACGAATAATTTTTCTTCCCCAAAATTACAACATTCCTTAGCTTCAGGTGTGCAACGGAAGCTGGAAATGGCAAATGAGGATGGAATTAAGAACAAGAAGTCATTGAAGACTGCTCAACAATCAAAATATCGATCACCAGGGAAAGACAGCCCGACTTCTATAAACAAAGGAAGAACAGCACGTGGGGTTTCAGAAACAGCTGAGAAGTTGGCCAATATGTCTATTGGTAGTCGAAGACAGTCCTTGGGACAAACCCGGCCGCCTCCAATGAAGGCTGGAGTCAATTGGACTTCTAAATCTGCAAACTTGTTGCTCAGGTCTGCAGAACAAATTCCAACTGGAAGAACTTGCACAAGAAAAGTTGCCGGATGA 1419 0.4334 MISTVYVMLASSETVAASLGNSYKYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILFLVFEYMECNLYQLMKNREKLFSEDEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKVADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSHLYSSKVDIWAMGAIMAELFTLRPLFPGTSEADEIYKICSVIGSPTTESWADGLKLARDINYQFPQLASVHLSVLIPSRSDDAISLITSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTRAVTRTPPSVGTRGSLDRQGIKRYSGALPNTKLTNNFSSPKLQHSLASGVQRKLEMANEDGIKNKKSLKTAQQSKYRSPGKDSPTSINKGRTARGVSETAEKLANMSIGSRRQSLGQTRPPPMKAGVNWTSKSANLLLRSAEQIPTGRTCTRKVAG* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0487 472 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Apr3g0487 472 SUPERFAMILY Protein kinase-like (PK-like) 23 308 IPR011009 -
Apr3g0487 472 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 24 425 - -
Apr3g0487 472 ProSiteProfiles Protein kinase domain profile. 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0487 472 MobiDBLite consensus disorder prediction 374 442 - -
Apr3g0487 472 Gene3D Phosphorylase Kinase; domain 1 15 103 - -
Apr3g0487 472 Gene3D Transferase(Phosphotransferase) domain 1 104 310 - -
Apr3g0487 472 SMART serkin_6 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0487 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Apr3g0487 472 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 425 - -
Apr3g0487 472 CDD STKc_MAK_like 25 304 - -
Apr3g0487 472 MobiDBLite consensus disorder prediction 383 409 - -
Apr3g0487 472 MobiDBLite consensus disorder prediction 419 433 - -
Apr3g0487 472 Pfam Protein kinase domain 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0487 Apr-Chr3 10104190 10111733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0487 24 311 Core Cell Cycle Gene Families AT3G48750 37.838 2.91e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Apr3g0487 Pkinase 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0487 K08829 - gmx:100784474 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0487 3 10104190 10111733 Apr3g0487 3 10104190 10111733 ECH