Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0136 ATGGATTGGGTTCGAGGAGACGCCGTTGGTCGAGGAAGCTTCGCCACCGTTAATTTAGCAATTCCCAAGACCAACTCCAACTCCTCTCAGTTTCCCTCTCTAACAGCCGTTAAGTCCTCTGAAGCTCTCACCTCCTCTTCGCTCAAAAACGAAAAACACGTGCTCGATCGCTTAGGCTCATGCCCAAGAATCATTCGATGCTTTGGAGATGACTATAGTTTTGAGAATGGTGTTGAGTACTACAACTTGTTCCTTGAATACGCCGCCGCCGGCAGCCTCGCCGACCAGCTTAAAATTCACGGTGGCCGGGTTCCGGAGCCAAACGTTCGGCGTTACGCGAGGTCCATCGTGGAGGGTCTTATTCATGTTCACCAAAAGGGGTTCGTTCACTGCGACATAAAGCTTCAAAATATTCTCGTATTCGAAGATGGTGAAATCAAGATCGCTGATTTTGGACTCGCGAAGGAGGCAGGGGCGAAACAGGGGAAGAGTGATGAGAGGTTCGAATGCAGGGGAACGCCGCTGTTTATGTCGCCGGAGTCGGTAAACGACGGCGAGTATGAGTCGCCGGCGGATATATGGGCTTTAGGGTGTGTGGTGGTGGAGATGGTTACCGGGAAACCGGCGTGGAAGGTCGAAAAGGAATCGAGTATGTGGTCGCTGTTGCTTCGAATTGGGGTGGGAGAAGAGGTTCCCGGGATACCCGAGGAGTTATCTCAAGAGGGGAAGGATTTTCTAGAGAAGTGTTTTGTGAAGGATCCTAGAAAGCGATGGAGTGCAGAGATGCTTTTGAATCACCCTTTTGTTTCTGATGACACTGTTCCATTTAAGCATGTTTATGAGTCACCGAGGAGTCACTTTGAGTTCCCTGATTGGGTTTCGAGTGTCGCGGCTTCAATTCCCAGTTCACCGGATTCTCAAGAGCCATGGACTTTTGATTCTTCTTCGTGTTTTAACAATAGTTTATATTCGCCGGTGGATCGGCTCCGGCAGCTTGTTACGGCTCGGAGGCCGGCGAGTGGGTCGGAATCTGATAGTTGGACTAGCGTTAGGTGA 1056 0.5047 MDWVRGDAVGRGSFATVNLAIPKTNSNSSQFPSLTAVKSSEALTSSSLKNEKHVLDRLGSCPRIIRCFGDDYSFENGVEYYNLFLEYAAAGSLADQLKIHGGRVPEPNVRRYARSIVEGLIHVHQKGFVHCDIKLQNILVFEDGEIKIADFGLAKEAGAKQGKSDERFECRGTPLFMSPESVNDGEYESPADIWALGCVVVEMVTGKPAWKVEKESSMWSLLLRIGVGEEVPGIPEELSQEGKDFLEKCFVKDPRKRWSAEMLLNHPFVSDDTVPFKHVYESPRSHFEFPDWVSSVAASIPSSPDSQEPWTFDSSSCFNNSLYSPVDRLRQLVTARRPASGSESDSWTSVR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0136 351 ProSiteProfiles Protein kinase domain profile. 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0136 351 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 311 - -
Apr3g0136 351 Gene3D Transferase(Phosphotransferase) domain 1 2 307 - -
Apr3g0136 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Apr3g0136 351 CDD STKc_MAPKKK 2 269 - -
Apr3g0136 351 SMART serkin_6 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0136 351 Pfam Protein kinase domain 6 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0136 351 SUPERFAMILY Protein kinase-like (PK-like) 3 320 IPR011009 -
Apr3g0136 351 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 311 - -
Apr3g0136 351 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0136 Apr-Chr3 2402240 2404429 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr3g0136 Pkinase 6e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0136 3 2402240 2404429 Apr3g0136 3 2402240 2404429 ECH
Apr7g0907 7 16086943 16098930 Apr3g0136 3 2402240 2404429 PCT