Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2643 ATGTCCAAATCTACAGGTTCAAAAAATAATTCATCTACAAGTTCAACAGAAGGTTCTTCCCCACTTACAAGAAGTCATGCTGACAAACTTGATGGATCAATAATCTCTTCTGGGTTTGACGAAGGATCATGCTTAAGTAGATTTCAGTCCTACTTATATCACAAAACATCCCCTCATAAACCCTCTCCATATCTCATATCCAAACTACGTAACTATGAAGATCTTCACAAAAGTTGTGGACCAAACACTAGATCTTACAAAAATACCATGGTGATGCTCAAAAGACATAAGACCAATGTTACCACTGAATGTAACTACATTGTGTGGACAGCTGCCAATGGCTTAGGGAACAAAATGGTGAGCATGGTTGCAGCATTCCTCTATGCAATTCTCACAGATCGAGTCTTACTAGTTGAATTTAAGGATGATATGATTGGTCTATTTTGTGAACCGTTCCCCAATTCATCATGGATATTGCCCAATGACTTTGCTTTTAGTAATAACAAAGGAAATATTGGAACATATGAAAACATGGTAAAGAAGCACAGAGAAAACAATTCAAAGGAGATTATACCCTCAGCTCTAAATCTAAAGATACAACATACCCATGATGATCATGAAAAGTTTTTCAGCTGTGATGATAGCCAACATCTTCTCCAAAAAGTTACCCTCTTGATTTTGTGCGCGGATCAATATTTTGTACCTTCTCTTTTTATGGTTCCATCCTTCACTCAAGAGTTAAGCAAAATGTTCCCTGAGAAAGACACAGTCTTCCACCATTTAGGACGCTACCTCTTTCTCCCTTCAAATGAGGTATGGGGACCAATTAGCAGATTCTATCAAGCATATTTAGCTAAGGCAGATGAGAGGATTGGCCTCCAAATAAGAGTATTTAGGCCCGATCGTACCCCATTTCAAACAATTATGAATCAAGTTTTAAGCTGCACCATAAAGTATAATATACTACCCAACATTACCACTGAAGATTCAAAATATTTTTGTTGGAAAAATCAGACTTTGAAGTCTGTTCTGGTAGCTTCTCTACATCCAGAATATGGTGAGAACCTTAGGACTATGTATTTGACAAAACCAACTGTTTCTGGGGAGGTGGTAAGTGTTTATCAGCCAAGTCACGAAGAGCATCAAAAGTTTGATGATAACAAGCATAATATGAAGGCATGGACAGAAATATATCTATTAAGTTTGTGTGATGTTTTGGTGACTAGCTCTCGATCGACTTTTGGGTATGTGGCTCAAAGTTTGGGAGGCCTGAAGCCATGGATTCTATACAAATTACGGAACACAAAAATCCATGATCCTCCATGTGTCCGAGACTTCTCTATGGAGCCTTGTTTTCATTTTCCGCCTAAACTTGATTGCATGGAAAAACCCATAGATTATACAAGTAAAGTTTTTCCTTATATTAGATGTATGGATTATGGACGGGGTGTTAAGTTGGTCAATGATTATCAGTAA 1476 0.376 MSKSTGSKNNSSTSSTEGSSPLTRSHADKLDGSIISSGFDEGSCLSRFQSYLYHKTSPHKPSPYLISKLRNYEDLHKSCGPNTRSYKNTMVMLKRHKTNVTTECNYIVWTAANGLGNKMVSMVAAFLYAILTDRVLLVEFKDDMIGLFCEPFPNSSWILPNDFAFSNNKGNIGTYENMVKKHRENNSKEIIPSALNLKIQHTHDDHEKFFSCDDSQHLLQKVTLLILCADQYFVPSLFMVPSFTQELSKMFPEKDTVFHHLGRYLFLPSNEVWGPISRFYQAYLAKADERIGLQIRVFRPDRTPFQTIMNQVLSCTIKYNILPNITTEDSKYFCWKNQTLKSVLVASLHPEYGENLRTMYLTKPTVSGEVVSVYQPSHEEHQKFDDNKHNMKAWTEIYLLSLCDVLVTSSRSTFGYVAQSLGGLKPWILYKLRNTKIHDPPCVRDFSMEPCFHFPPKLDCMEKPIDYTSKVFPYIRCMDYGRGVKLVNDYQ* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2643 491 Pfam Xyloglucan fucosyltransferase 12 460 IPR004938 GO:0008107|GO:0016020|GO:0042546
Apr2g2643 491 Gene3D - 101 171 - -
Apr2g2643 491 MobiDBLite consensus disorder prediction 1 27 - -
Apr2g2643 491 Gene3D - 275 433 - -
Apr2g2643 491 PANTHER FUCOSYLTRANSFERASE 2-RELATED 11 489 IPR004938 GO:0008107|GO:0016020|GO:0042546
Apr2g2643 491 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 11 489 - -
Apr2g2643 491 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2643 Apr-Chr2 30227811 30229286 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2643 15 488 Xyloglucan Fucosyltransferase1 AT1G14100 48.560 3.37e-165 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2643 K13681 - gmx:100809919 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2642 2 30223181 30225545 Apr2g2643 2 30227811 30229286 PCT