Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2286 ATGGTTTTCTCTTCTATTCCAATCTATTTAGATCCTCCCAATTGGCAGCAACAACCAGATCAACATCAAGCAAATGGAAGCAACAACAGTCCTCAGCTGCTTCCACCGCTTCCCCAACAGCCACAGGTTCCTCATGTGGGGGTTGATGCAGGCCCAATCAGGCCCGGATCGATAGTGGATCGGGCCAAGATACAGCCGCAGGAGGGAGTTCTGAAGTGTCCTCGTTGTGAATCGACCAACACAAAGTTTTGCTACTTCAACAATTATAGCCTCTCTCAGCCACGGCACTTTTGCAAGACATGTAGGCGTTATTGGACAAGAGGAGGGGCTCTTAGGAATGTTCCTGTTGGTGGAGGATGCCGCAGGAACAAGAAGAACAAAAGGAGTCGTTCTAAATCTCCCGTTTCTACTGAGAAACCGTCCCTTTCCAATACCGCAAGTGCAATCCCTGAGATAATTGGAAGGTTCCCACAACCTTTCATGACTTCTCTTCAGAACATGAGCCGCTATGGTGTAGGGAACACAGGCATGAGCTTGCGTGAGATTCAAGCACAGTCTGGTACTCATATGGGGTTTCAAATTGGTGGTCATAGTACAAGTGCTACTATAGGAGGAGGAGGGATGGATCAGTGGCGGTTTCAGCAATTTCCTTTCTTGAATGCTTTTGAGTCAGCTTCAGCTGTTTCCTACCCATTTCAAAGTGAAAGTGTTGAAAGTTTGGTTGGAGATATTGCTGCAACTTCTAGGGTTACTCAGCTTCCAACACCGGTTAAATTGGAATATAACGGAGGTTTAAATTTGTCAAGATCTCCACTCTGTGTTTCAGAGAATAACAACCATTACTATTCATGGACCGATTTATCTGGTCTTGCATCATCTTCAGCTAGTCATCTCTTGTAA 900 0.4567 MVFSSIPIYLDPPNWQQQPDQHQANGSNNSPQLLPPLPQQPQVPHVGVDAGPIRPGSIVDRAKIQPQEGVLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPVSTEKPSLSNTASAIPEIIGRFPQPFMTSLQNMSRYGVGNTGMSLREIQAQSGTHMGFQIGGHSTSATIGGGGMDQWRFQQFPFLNAFESASAVSYPFQSESVESLVGDIAATSRVTQLPTPVKLEYNGGLNLSRSPLCVSENNNHYYSWTDLSGLASSSASHLL* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2286 299 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 6 295 - -
Apr2g2286 299 MobiDBLite consensus disorder prediction 115 144 - -
Apr2g2286 299 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Apr2g2286 299 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
Apr2g2286 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 295 IPR045174 GO:0003700|GO:0006355
Apr2g2286 299 MobiDBLite consensus disorder prediction 11 33 - -
Apr2g2286 299 MobiDBLite consensus disorder prediction 11 55 - -
Apr2g2286 299 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2286 Apr-Chr2 27884570 27888838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2286 54 284 C2C2-Dof Transcription Factor Family AT3G55370 42.857 1.41e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Apr2g2286 zf-Dof 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2286 - - gmx:100775899 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2286 2 27884570 27888838 Apr2g2286 2 27884570 27888838 ECH
Apr2g2286 2 27884570 27888838 Apr3g1471 3 29321649 29324698 PCT