Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1876 ATGGGCATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGAGGCCACATTGTTCGATCCACAGGTAGAAAAGATAGGCATAGCAAGGTGTACACTGCAAAGGGTCCTCGTGATCGCAGGGTTAGGCTATCAGCACACACAGCCATTCAATTCTATGATGTTCAAGATCGTTTAGGCTATGACAGACCCAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCCAAGGCTGCCATTGACAAGCTTGCTGAGCTTCCTCCATGGCACCCTCCTCCTAACACCACAGATGCTGAACACAACAATAACAATGCAGGTTCTAATGACATGGCAATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTTCAAAGGCAATTAGGTGAGGACCCTGATAACCACCATTCAGCTTTCATTCCTTCACCTATTGACACTGATGCCATAGCCTTTTTTCCCACCACCACTGCTACTTCCTCCATTAATTTTCAAAGCTACCCACCTGACATAATCTCCAGAACCAACAACTCCACTGAGGATCTTGGCCTGTCTCTTCATTCCTTCCAAGATTCTGGTCTGATCCATCATGGGCAGTCCCAAGCAGGTGCAAATCAAACACCTTCCAATGACCAAACCCTCTTTTCTGGCTCAACTCAAGTTGGGTTTGAGGCCAATTACCACAGGATTGTGAATTGGAACAATGATGCTACCACTGATATGAACAGAACCGGGTTCATGGTCAATCCACCTGCTCTTCTAGGCCAAGGTGGTTCTGCTGCATATTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGACATTCCCATGGCTTCCTCTGAGCATCACAAGTCTCAACCAATTCAACAAGCTTCCATCTTTGGCAGCAGGTTTCTGTCTGATGCCTTGCCAGGGTTCTGCATTCCTGCAAGAATTCAAGGGGAGGATGAGAGCCATGGAGTTGCTTCAGATAAGCCATCATCTTCTTCTCCTAATTCTCATCACTGA 1026 0.4737 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDKLAELPPWHPPPNTTDAEHNNNNAGSNDMAIAEQSESSGYNFQLQRQLGEDPDNHHSAFIPSPIDTDAIAFFPTTTATSSINFQSYPPDIISRTNNSTEDLGLSLHSFQDSGLIHHGQSQAGANQTPSNDQTLFSGSTQVGFEANYHRIVNWNNDATTDMNRTGFMVNPPALLGQGGSAAYSQRGTLQSSFSPSLRPWSDIPMASSEHHKSQPIQQASIFGSRFLSDALPGFCIPARIQGEDESHGVASDKPSSSSPNSHH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1876 341 PANTHER TRANSCRIPTION FACTOR TCP4 2 341 - -
Apr2g1876 341 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 341 IPR005333 GO:0003700
Apr2g1876 341 MobiDBLite consensus disorder prediction 84 107 - -
Apr2g1876 341 MobiDBLite consensus disorder prediction 320 341 - -
Apr2g1876 341 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Apr2g1876 341 Pfam TCP family transcription factor 23 125 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1876 Apr-Chr2 24315581 24318917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1876 8 341 TCP Transcription Factor Family AT3G15030 43.890 2.96e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr2g1876 TCP 4.7e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1876 2 24315581 24318917 Apr2g0440 2 5106308 5109916 ECH
Apr2g1876 2 24315581 24318917 Apr5g0149 5 1296261 1299293 ECH
Apr2g1876 2 24315581 24318917 Apr2g1876 2 24315581 24318917 ECH
Apr2g1876 2 24315581 24318917 Apr3g0993 3 24783493 24787425 ECH
Apr5g0149 5 1296261 1299293 Apr2g1876 2 24315581 24318917 PCT