Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1793 ATGGTTTTTCCAAAACCACCTTCTGAGTCTGACCTCTTTCTCCACCATTCCAACTTTGCTTCCCCTTATGCCACGGACTCTCTTCCTAGGTTCTGCATGCCGGAGAACTCGATGCCCAAGGAAGCTGCATACCAGAACATACACGATGAACTGCAGCTTGATGCCATTCCAAAGCTGAACCTGGCTTCCTTTGTCACCACATCCATGGAGGAAGAGTGCAACAAGCTAATAATGGAATCCATCAACAAGAACTATGTCGACATGGACGAGTATCCTGTCACCACTGACCTTCACAACCGGTGCGTGAACATGATAGCACGTTTGTTCCATGCTGAAATTGGAGAAAATGAGACTGCAGTTGGAGCTGGAACCGTTGGATCCTCAGAGGCCATAATGCTGGCGGGTCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGGAAGGCAGAGGGAAAACCCTATGATAAGCCCAACTTGGTCACTGGTTCCAATGTGCAGGTATGTTGGGAGAAATTTGCTAGGTATTTTGAGGTGGAGTTAAGGGAAGTGGAGGTGAGGGAAGGGTATTACGTGATGGACCCTGCCAAAGCCGTTGAACTGGTAGATGAGAACACTATCTGTGTGGCTGCAATCCTGGGTTCAACTTATAATGGAGAGTTCGAAGATGTCAAGCTCTTAAATGACCTACTGATGGAAAAAAACAAGCAAACTGGATGGGATACGCCTATTCATGTTGATGCCGCTAGTGGTGGCTTTATTGCTCCTTTCCTTTATCCAGAGCTAGAATGGGATTTCAGACTCCCATTGGTGAAAAGCATTAATGTTAGTGGCCACAAGTATGGTCTTGTTTATGCGGGAATTGGTTGGGTTATATGGAGGACCAAGGAAGACTTGCCAGAGGACCTTGTCTTCCACATTAATTACCTCGGAGCTGACCAACCCACCTTCACCCTCAATTTTTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAACTAATTCGCCTTGGCCAAGAGGGGTACCGGAGCATAATGGAGAACTGCAGAGAAAATGCAATGTTGCTGAAGGAACGGCTGGAGAATAATGGACGCTTCAACATACTCTCAAAAGACGATGGTGTTCCTGTGGTGGCATTTTCTCTCAAGGACAGGACCAAGTACGACGAGTACAAGATATCAGAGATGTTGAGGCGCCACGGTTGGATCGTTCCGGCTTATCCAATGCCACCAGCAGCTCAACACATCAACGTGCTGCGCGTGGTGATAAGGGCAGAGTTTTCACGCACCCTTGCTGAACGGCTTGTGCTTGACATAGAAAATGTGGTGCATGAGCTTGAAAAGGTTCTTCCCCCCAAAGAAGTGACCAATATTAAGGAAGAGAAGAAGGCCTTGGTTGACACTGGGGTCAAGAAGACTGCACTGGAAGCACATAGGGAAATCATTGCTCAAGAATCCAATAAGCGTCAGAAAATCATGGCTGCTTAG 1485 0.4687 MVFPKPPSESDLFLHHSNFASPYATDSLPRFCMPENSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPVTTDLHNRCVNMIARLFHAEIGENETAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLMEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAMLLKERLENNGRFNILSKDDGVPVVAFSLKDRTKYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVLDIENVVHELEKVLPPKEVTNIKEEKKALVDTGVKKTALEAHREIIAQESNKRQKIMAA* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1793 494 Gene3D - 1 66 - -
Apr2g1793 494 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 18 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Apr2g1793 494 CDD DOPA_deC_like 60 439 - -
Apr2g1793 494 Pfam Pyridoxal-dependent decarboxylase conserved domain 34 382 IPR002129 GO:0016830|GO:0019752|GO:0030170
Apr2g1793 494 SUPERFAMILY PLP-dependent transferases 19 447 IPR015424 -
Apr2g1793 494 Gene3D - 362 448 - -
Apr2g1793 494 Gene3D - 67 361 IPR015421 GO:0003824
Apr2g1793 494 PANTHER GLUTAMATE DECARBOXYLASE 1 493 IPR010107 GO:0004351|GO:0006536|GO:0030170
Apr2g1793 494 PANTHER GLUTAMATE DECARBOXYLASE 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1793 Apr-Chr2 23579710 23582734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1793 1 482 Calmodulin-binding Proteins AT5G17330 75.820 0.0 761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1793 2 23579710 23582734 Apr2g1793 2 23579710 23582734 ECH