Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1755 ATGGACAAATCGCACAGCTTTCTTCACAGTATTGTGAAACACTTCAAATTCGGTTCTAGTAAAGAGCGAAACAATGAAGCTGACATACAGAAAATGGCGGCACAGGAGCAGAAGGTATTTGCCTATGAAACCTTGGTTGCTGTCACCAAGAATTTTAGTGCTCTTCATAAGCTAGGCGAGGGAGGTTTTGGACCTGTCTACAAGGGTAAGCTGAATGATGGGAGAGAGATTGCAGTGAAGAAGTTGTCGCACACTTCAAACCAAGGGAAGAAGGAATTCATGAATGAGGCCAAATTGTTGGCTCGTGTGCAGCATCGGAATGTGGTGAATTTGTTGGGTTATTGTGTCCATGGCACAGAGAAGCTACTTGTTTACGAGTATGTGTCTCACGAGAGCCTTGACAAACTTCTATTCAAATCGCAGAAGAGAGAGCAGCTTGATTGGAAACGTAGGTTGGGCATAATCACAGGCGTGGCAAAGGGGTTGCTTTATCTTCACGAAGACTCGCACAATTGCATCATCCATCGTGACATAAAGGCGAGTAACATTTTGCTTGATGACAAATGGACGCCCAAGATTGCAGATTTTGGCATGGCCCGTCTCTTCCCCGAAGATCAAAGCCAGGTCAATACACGTGTGGCTGGAACCAATGGGTATATGGCTCCGGAGTATGTGATGCATGGAAATCTATCGGTAAAGGCAGACGTATTTAGCTATGGAGTTTTGGTATTAGAGTTGATCACTGGCCAACGAAATTCGTCCTTCAATTTGAGTGTGGATGCGCAGAATCTGCTTGATTGGGCATACAAAATGTACAAGAAAGGGAAGAGCTTAGACATTGTAGATCCTGCATTAGCATCTACAGCGGAAGCAGAACAAGTGAGCATGTGCATTCAACTTGGTCTGCTATGCGCTCAAGGTGATCCACAGCTACGTCCAACGATGAGGCGCGTGGTGGTGATGCTGTCACGGAAGCCAGGACACATGGAAGAACCAACGAGACCAGGAGTACCTGGTTCAAGATATAGAAGACCTCGCAGGCACTCTGCATTGTCTTCCACTGCGGGTACCTCTGATTCACACACTTCTGATTCAAGCAATAACAATACTACTGTTACTACTGCAACGGGAACAAGCTCCGCAACTGCTACTGTAGAAATTGACACAAGAGGGAAACGTCCAATGTATTAA 1191 0.4576 MDKSHSFLHSIVKHFKFGSSKERNNEADIQKMAAQEQKVFAYETLVAVTKNFSALHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEAKLLARVQHRNVVNLLGYCVHGTEKLLVYEYVSHESLDKLLFKSQKREQLDWKRRLGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELITGQRNSSFNLSVDAQNLLDWAYKMYKKGKSLDIVDPALASTAEAEQVSMCIQLGLLCAQGDPQLRPTMRRVVVMLSRKPGHMEEPTRPGVPGSRYRRPRRHSALSSTAGTSDSHTSDSSNNNTTVTTATGTSSATATVEIDTRGKRPMY* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1755 396 MobiDBLite consensus disorder prediction 350 386 - -
Apr2g1755 396 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Apr2g1755 396 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1755 396 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 375 - -
Apr2g1755 396 SUPERFAMILY Protein kinase-like (PK-like) 37 343 IPR011009 -
Apr2g1755 396 CDD STKc_IRAK 58 324 - -
Apr2g1755 396 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1755 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Apr2g1755 396 MobiDBLite consensus disorder prediction 322 396 - -
Apr2g1755 396 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Apr2g1755 396 PANTHER RECEPTOR-LIKE KINASE 3 375 - -
Apr2g1755 396 Pfam Protein tyrosine and serine/threonine kinase 55 321 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1755 Apr-Chr2 23208702 23213459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1755 40 336 Receptor kinase-like Gene Family AT4G11530 51.505 5.31e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g1755 PK_Tyr_Ser-Thr 2e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1755 2 23208702 23213459 Apr2g1755 2 23208702 23213459 ECH