Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1747 ATGAAAAGGGAGCACGAGCATCTCTGTTCAAACGCATCGACGGCAACATCGAGCTGCGGCGTTTGGGAGGAGGAAGAGGTGATGGACGAGCTTCTGGCGATGGTGGGCTACAAGGTGAGGTCATCTGACATGGCGGAAGTGGCGCAGAAGATTGAACAGCTCGAAGAAGCCATAGGAAGCGTCCAAGATGGCATCACGCACCTTTCATCGGAAACCGTTCACTACAACCCTTCCGATATCTCAAACTGGGTCGAAACCATGCTCTGCACTATCGATCCCTTACCTCCTTCCTCTGTCTTAATCGACCAACCAAACAGGCCCTTCGAAGATTCCTCCTCTTCCGATTACGATCTAAAGGTTATTCCAGGGAAAGCAATCTACGCTTCCAGCAGCACAGCCAGCACCGACTCTCCCGCGCCAAACCCTAAGCGTCTCAAAACAACTGAGTCAACTCGCGCGGTGGTGGTCGTTGACTCGCAGGAGAACGGGATCCGGCTTGTGCACAGCATCACGGCGTGCGCGGAGGCCGTCGAGAAAAACAACCTCGCCGTGGCGGAGGCGCTGGTGAAGCAGATCGGCTTCCTCGCCGTGTCGCAGGTCGGAGCGATGCGCAAGGTCGCCACCTACTTCGCAGAAGCGCTGGCGCGGCGAATCTATCGTGTTTACCCGGAGAATCCGCTTCAGCATTCTTTCGCCGATAACCTTCAGATTCACTTCTACGAGACTTGTCCTTACCTGAAGTTTGCGCACTTCACCGCGAACCAGGCCATTCTCGAAGCGTTCCAAGGGAAGAACCGCGTCCACGTCATCGATTTTGGAATCAACCAAGGGATGCAATGGCCGGCGTTGATGCAGGCTCTCGCTGTTCGTCCCGGCGGTCCTCCCGCTTTCCGGCTAACCGGAATCGGACCGCCCGCCGCCGATAACTCCGACCACCTCCAAGAAGTTGGACGGAAGCTCGCTCAGTTGGCGGAAGCCATTCACGTGCAGTTCGAATACCGAAGCTTCGTCGCCAACAGCCTCGCCGATCTCGACGCTTCCATGCTCGAAGTCAGACCTAGCGACGCCGAGTCGGTCGCCGTTAACTCCGTTTTCGAGTTTCACAAACTTCTCGCTCGCCCAGGCGCCGTGGAGAAGGTTCTGTCGATGGTCCGGCAGATTCGGCCGGAGATTCTCACTGTGGCGGAGCAGGAGGCGAACCACAACGGACCGGGTTTTCTGGATCGGTTCACTGAGTCGCTGCACTATTACTCGACTCTGTTCGACTCGCTAGAAGGGTCGTCGGTGAGCACGCAGGACAAGGTGATGTCGGAGATGTACTTAGGGAAGCAAATCTGTAACGTGGTGGCGTGCGAGGGATTGGAGCGCGTGGAGCGTCACGAGACGCTGAACCAGTGGCGGACCCGGTTCAGTTCGGCCGGGTTTTCTCCGGTTCATTTAGGGTCTAACGCGTTTAAGCAAGCGAGCACGTTGTTGGCGCTGTTTGCGGGTGGGGAAGGGTATAGGGTGGAAGAGAACAATGGCTGTCTCATGCTGGGTTGGCACACTAGGCCTTTGATTGCCACATCTGCGTGGCAACTCGCCAGCAAATCGGTGGTTGCGCACTGA 1608 0.569 MKREHEHLCSNASTATSSCGVWEEEEVMDELLAMVGYKVRSSDMAEVAQKIEQLEEAIGSVQDGITHLSSETVHYNPSDISNWVETMLCTIDPLPPSSVLIDQPNRPFEDSSSSDYDLKVIPGKAIYASSSTASTDSPAPNPKRLKTTESTRAVVVVDSQENGIRLVHSITACAEAVEKNNLAVAEALVKQIGFLAVSQVGAMRKVATYFAEALARRIYRVYPENPLQHSFADNLQIHFYETCPYLKFAHFTANQAILEAFQGKNRVHVIDFGINQGMQWPALMQALAVRPGGPPAFRLTGIGPPAADNSDHLQEVGRKLAQLAEAIHVQFEYRSFVANSLADLDASMLEVRPSDAESVAVNSVFEFHKLLARPGAVEKVLSMVRQIRPEILTVAEQEANHNGPGFLDRFTESLHYYSTLFDSLEGSSVSTQDKVMSEMYLGKQICNVVACEGLERVERHETLNQWRTRFSSAGFSPVHLGSNAFKQASTLLALFAGGEGYRVEENNGCLMLGWHTRPLIATSAWQLASKSVVAH* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1747 535 Pfam GRAS domain family 166 526 IPR005202 -
Apr2g1747 535 Gene3D - 27 91 IPR038088 -
Apr2g1747 535 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Apr2g1747 535 PANTHER DELLA PROTEIN GAI1-RELATED 153 527 IPR030006 GO:0003712|GO:0005634
Apr2g1747 535 PANTHER DELLA PROTEIN GAI1-RELATED 21 130 IPR030006 GO:0003712|GO:0005634
Apr2g1747 535 ProSiteProfiles GRAS family profile. 157 526 IPR005202 -
Apr2g1747 535 Coils Coil 44 64 - -
Apr2g1747 535 Pfam Transcriptional regulator DELLA protein N terminal 29 94 IPR021914 -
Apr2g1747 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 153 527 IPR005202 -
Apr2g1747 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 130 IPR005202 -
Apr2g1747 535 SMART DELLA_2 29 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1747 Apr-Chr2 23133665 23136258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1747 1 529 GRAS Transcription Factor Family AT2G01570 63.761 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr2g1747 GRAS 2.8e-136 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1747 2 23133665 23136258 Apr2g1747 2 23133665 23136258 ECH