Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1472 ATGGATAAGCTCTTTTTCAACTGTTGCATTGGATACTGTCTTCTTTGTTCTCTTTTGCTTGTGCATGGCAATGAATTATCATGCAATCAAACCCCATACCCTCATGTGTGCATGCATTACATTGGCATTACCAACACATTATCAACCCTAGATGCTTCATCATACTCCTTCCATGATATGGCCCTTAAGGTCACCATGGAGCAAGCCATTCAAGCCCACAAACTTGTCTCAACCATGGAATTAAATAATTTCAAGGACAACCGAGCCAAGTCTGCATGGGATGATTGTTTGGAGCTCTATGAGGACACAATTTATCAACTCAAACGCTCCATGAACTCAAACAATATAAATGATAGGCTAACATGGCAAAGTGCATCCGTTGCCAATCATCAAACATGTCAAAATGGTTTCAATGAATTCAACCTTCCCTCTCACCTAAACCACTTCCCCTCCATGTTAAGCAACTTCTCCAAGTTGCTTAGCAATTCCTTGTCCATTAGCAACACCATGTCTTTGACATCATCATTATCAACCAAACAAAGTGGTGGGCGAAGGTTGCTATCAAATCAATATGGCTTCCCCTATTGGCTCTCTCCATCAGATAGAAAGCTTCTTCAGGCAACAACAACACCAAAAGCTGATATTGTGGTGGCACAAGATGGAACTGGGAACTACAAGACCATTTCTCAAGGTGTGGCTGCAGCTGCTAAGATGAGTGGGAAAGGACGTGTTGTTATGCACGTCAAAGCTGGTGTTTACCATGAGAGTGTTGATATCAAGAGGACAGTGAAGAACTTGATGATCATTGGAGATGGAATCGGTGCTACTATTGTTACGGCTAATCATAACGTACAAGATGGCTCCACTACTTTTCGTTCTGCTACCTTTGCGGTTTCCGGTGAGGGTTTCATCGCTCGGGACATAACCTTCGAGAACAGCGCGGGACCACAAAAGCACCAGGCAGTGGCCCTCCGTTCCGGCGCCGACCACTCAGTGTTCTACCGGTGTAGCTTTAAGGGCTACCAAGACACCTTATACGTCTATGCCCAACGCCAATTCTACCGTGACTGTGACATATACGGAACCATAGACTTCATTTTCGGGGACGCCGTTACGGTGTTTCAAAACTGCAACATCTACGTGAGAAAACCCATGAGCAACCAGGGCAACACCGTGACGGCGCAAGCCAGAAGCGATCCTAACGAGAATACGGGTATCATCATCCATAACTGTCGCGTCACTGCAGCTTCGGACTTGAAACCTGTGCAGGGTTCTTTCAAAACGTTTCTGGGTCGTCCATGGCAAAAGTACTCGAGGACGGTGGTCATGAAGAGTACCCTTGATGGGCTGATTCACCCTGCAGGTTGGTCTCCGTGGAGTGGAAACTTCGCTTTGAGCACCCTCTATTACGGTGAGTATATGAATACAGGAGCTGGTGCTAGCGCCGGAGGCAGGGTGAACTGGCCAGGGTTTCATATGATCAGAAACCCTACTGAGGCTGTGAAATTCACTGTTGGAAATTTCTTGTCTGGGGACTCGTGGATTTCTGGTAGTGGCGTGCCGTTCGATTCAGGTTTGTGA 1581 0.4649 MDKLFFNCCIGYCLLCSLLLVHGNELSCNQTPYPHVCMHYIGITNTLSTLDASSYSFHDMALKVTMEQAIQAHKLVSTMELNNFKDNRAKSAWDDCLELYEDTIYQLKRSMNSNNINDRLTWQSASVANHQTCQNGFNEFNLPSHLNHFPSMLSNFSKLLSNSLSISNTMSLTSSLSTKQSGGRRLLSNQYGFPYWLSPSDRKLLQATTTPKADIVVAQDGTGNYKTISQGVAAAAKMSGKGRVVMHVKAGVYHESVDIKRTVKNLMIIGDGIGATIVTANHNVQDGSTTFRSATFAVSGEGFIARDITFENSAGPQKHQAVALRSGADHSVFYRCSFKGYQDTLYVYAQRQFYRDCDIYGTIDFIFGDAVTVFQNCNIYVRKPMSNQGNTVTAQARSDPNENTGIIIHNCRVTAASDLKPVQGSFKTFLGRPWQKYSRTVVMKSTLDGLIHPAGWSPWSGNFALSTLYYGEYMNTGAGASAGGRVNWPGFHMIRNPTEAVKFTVGNFLSGDSWISGSGVPFDSGL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1472 526 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 171 IPR035513 -
Apr2g1472 526 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 19 525 - -
Apr2g1472 526 Pfam Pectinesterase 214 512 IPR000070 GO:0030599|GO:0042545
Apr2g1472 526 SUPERFAMILY Pectin lyase-like 208 525 IPR011050 -
Apr2g1472 526 PANTHER PECTINESTERASE 19 525 - -
Apr2g1472 526 SMART PMEI_2 21 166 IPR006501 GO:0004857
Apr2g1472 526 ProSitePatterns Pectinesterase signature 2. 359 368 IPR033131 -
Apr2g1472 526 TIGRFAM PME_inhib: pectinesterase inhibitor domain 27 170 IPR006501 GO:0004857
Apr2g1472 526 CDD PMEI-like_3 26 171 - -
Apr2g1472 526 Pfam Plant invertase/pectin methylesterase inhibitor 27 166 IPR006501 GO:0004857
Apr2g1472 526 Gene3D - 208 526 IPR012334 -
Apr2g1472 526 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 170 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1472 Apr-Chr2 20751390 20754798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1472 4 526 Carbohydrate Esterase AT1G23200 52.899 0.0 557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1472 2 20751390 20754798 Apr2g1472 2 20751390 20754798 ECH