Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1458 ATGGCTGAATTCACTGCAGATATGCAAAGTTTTAGACCCTCGTGTCCTTTCTTGGATATTGATAACATGGAACTGACAAATCAATTCAAAGGGGTGATGCCATTCTCCTATGACAGCTTCTTGGGCTCTCTAGAACCTGAATTTGCAGGAAACTTAGAAGAAAGTTTTCTAGGCCTTGTGCAATGTGTCAGTCACAATGCAGTTCCAATTTCACTCCCTATTTCTTCAGCAGAAAGTGAAATCCATGAAGGTAAAAAGAGGAAAGCAATCGATATGTGTGAACCAAGTTCTGCAAATTCCACTCCTGCAGTTTGTGAAAGTGGAAGAAAGATAAAAAATTGTTCTGGAGGAGGTAAGAGAGTAAAAAAGAATGTAACAGAAGACAAGAAACCGAATGAAGTAGTTCACGTTAGAGCCAAACGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGGGGAAAAATCAATGAGAAACTTAAGCGCTTGCAGAACATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAATAATGTTGGATGAGATCATAAACTATGTCCAGTCCTTGCAGCATCAAGTGGAGTTCCTCTCTATGAAGCTTACTGCAGCAAGTACCTTTTATGACTTCAATTCAGAGACAGATGCTTTAGAAACAATGCAGAGAACAAAGGCATCCGAGGCAAAAGAGTTGGCCAAGTATGTGAGAGAAGGATATGAAGGAGTTTCTTGCTTTCAACCAACTTGGCCTTGGTCCCTGTGA 771 0.4099 MAEFTADMQSFRPSCPFLDIDNMELTNQFKGVMPFSYDSFLGSLEPEFAGNLEESFLGLVQCVSHNAVPISLPISSAESEIHEGKKRKAIDMCEPSSANSTPAVCESGRKIKNCSGGGKRVKKNVTEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLKRLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSETDALETMQRTKASEAKELAKYVREGYEGVSCFQPTWPWSL* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1458 256 PANTHER TRANSCRIPTION FACTOR BEE 1 3 253 - -
Apr2g1458 256 Coils Coil 220 240 - -
Apr2g1458 256 SMART finulus 149 199 IPR011598 GO:0046983
Apr2g1458 256 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 3 253 IPR024097 GO:0006355
Apr2g1458 256 CDD bHLH_AtBPE_like 133 218 - -
Apr2g1458 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 193 IPR011598 GO:0046983
Apr2g1458 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 211 IPR036638 GO:0046983
Apr2g1458 256 Pfam Helix-loop-helix DNA-binding domain 147 194 IPR011598 GO:0046983
Apr2g1458 256 Gene3D - 139 202 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1458 Apr-Chr2 20640219 20641660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1458 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 43.310 1.04e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr2g1458 HLH 7.5e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1058 6 15273265 15275040 Apr2g1458 2 20640219 20641660 ECH
Apr7g1229 7 19395019 19396368 Apr2g1458 2 20640219 20641660 ECH
Apr2g1458 2 20640219 20641660 Apr2g1458 2 20640219 20641660 ECH