Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0954 ATGGGATCTCAAGGTGATGCTGGTGATAATAATGGAAAACATTCACAACTCCAGCCGTTGGTGCGGCAAAATTCAATGTACAGTCTCACACTTGATGAAGTTCAGAATCAATTAGGTGACTTAGGAAAACCACTAAGTAGCATGAACCTTGATGAGCTTCTAAAAACTGTTTGGACCGTTGAGGCAAACCAGTCCAAGGCGGATATTGAGGGTACAGCTCAAGCTGGTCAAGCTACTCTGCAGCGTCAAGCTAGTTTGTCATTAACTAGCACTCTAAGCAGCAAGACAGTTGATGAGGTTTGGAGAGATATCCAACAAAGCAAAGATGACAAGGAGAAGAAGTCTCGATCAAGACAGCCTACATTGGGAGAGATGACGTTGGAGGATTTCTTGGTAAAAGCAGGGGTTGTTGCTGAAGCAGCATCTAATAGAAAGAATACTCGTCCTACAGTTGGTGCTGATGCAAATATAGCAGCACCACAACATGGCCCTTGGATACAGTATCCACAACCGCAATATCAGCATCCACAACAAGGTTTAATGGGGATTTACGTGCCTAGTCAGAATATAGCACAACCATTACACATGGGGGGTGGTGCTACATTGGATGTTCCATACGTAGATGGTGAGGTGGCATTGTCTTCACCTATGATGGGAGCCTTGTCAGACACTAAGAAAACTGGGCGAAAACGGGGCACATCAGAGGACATGGTAGAGAAGACTGTTGAGAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCTAGAGCAAGGAAGCAGGCCTACACAACCGAATTGGAGAACAAAGTCTCACGTCTGGAAGAGGAAAATGAAAAGCTGAGGAGACAGAAGGAACTAGAGAAAATGTTATCCAGTGCTCCACCTCCTGAACCTAGATATCAGCTTCGCCGAACATCATCGGCGTCATTCTGA 945 0.4571 MGSQGDAGDNNGKHSQLQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKTVWTVEANQSKADIEGTAQAGQATLQRQASLSLTSTLSSKTVDEVWRDIQQSKDDKEKKSRSRQPTLGEMTLEDFLVKAGVVAEAASNRKNTRPTVGADANIAAPQHGPWIQYPQPQYQHPQQGLMGIYVPSQNIAQPLHMGGGATLDVPYVDGEVALSSPMMGALSDTKKTGRKRGTSEDMVEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSRLEEENEKLRRQKELEKMLSSAPPPEPRYQLRRTSSASF* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0954 314 CDD bZIP_plant_BZIP46 244 293 - -
Apr2g0954 314 MobiDBLite consensus disorder prediction 220 314 - -
Apr2g0954 314 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 16 312 - -
Apr2g0954 314 Coils Coil 260 294 - -
Apr2g0954 314 Pfam bZIP transcription factor 244 293 IPR004827 GO:0003700|GO:0006355
Apr2g0954 314 Gene3D - 242 297 - -
Apr2g0954 314 SUPERFAMILY Leucine zipper domain 244 289 IPR046347 GO:0003700|GO:0006355
Apr2g0954 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 242 287 IPR004827 GO:0003700|GO:0006355
Apr2g0954 314 MobiDBLite consensus disorder prediction 224 292 - -
Apr2g0954 314 MobiDBLite consensus disorder prediction 1 21 - -
Apr2g0954 314 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 312 IPR043452 GO:0003700|GO:0045893
Apr2g0954 314 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 247 262 IPR004827 GO:0003700|GO:0006355
Apr2g0954 314 SMART brlzneu 240 308 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0954 Apr-Chr2 15615024 15618531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0954 18 314 bZIP Transcription Factor Family AT3G56850 56.169 6.94e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr2g0954 bZIP_1 4.5e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0954 2 15615024 15618531 Apr5g0868 5 12757600 12761956 PCT