Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0948 ATGGAAGAAGAGAAAAATATTGGGCAGCCACTGTTGAAGAAAAGGTACTATGAGAACTGCCCTGGTTGTAAGGTGGATCAAACCAAGGAGTTGAAAAAGGATGTTACCTTTAGAAATATCTTGAATATATGGATTATAGCGTTATGTGGTGCTCTACCTATAGCATCTCTCTTTCCTTACCTTTATTTCATGGTGAAAGATTTTAACATAGCAGAAAGAGAGGAAGATATTAGTGCCTATGGTGGTTATGTGGGATCTGCATTCATGCTTGGTAGATGTTTGACAGCTATATTATGGGGAGTAATAGCCGATCGCTATGGTAGAAAACCGGTTATGATTATAAGTATTATCGCTATTGTCATTTTCAACACACTATTTGGCCTTAGCTCAAGTTTTTGGATGGCTGTCATTACAAGATTTATTCTTGGAGGTTTTAATGCTTTGATGGGAACAATAAGGGCTTATGCTAGTGAAATATTTCGAGAAGAATACCAAGCTCTGGGGATCTCAACCGTCTCAGCTGCTTGGGGAGTGGGACTAGTCTTTGGCCCAGCAATTGGAGGTTATTTGGCTCAGCCAGTAGAGAAATACCCCAAAGTGTTTCAAAGGGGTTCTTTGTGGGATAAGTTTCCATACTTTATGCCATGCCTTGTAATATCAACTTTTGCATTTGCAGTGGCAATTGCTTGCATTTGGCTTCCAGAGACACTTCACAACCACAAAGTGTCCTCTGACAACGATGAAGCCTTAGAAAATGGATGCAGCGGAGATGACAACGACAAGAACATCCAAAAAAGTGAAAGTCTTTTCAGAAATTGGCCGTTAATGTCATCTATCATTGTTTATTGTGTTTTTTCACTTCATGACATTGCTTTTTCAGAGGTTTTCTCGTTATGGGTTGTAAGTCCTCGAAGGTTGGAAGGTTTAAACTTTACAACAAATGATGTTGGTAACATTCTTTCAGTAGCAGGTTTGGCTATTTTAATCTTCCAACTTGGCCTTTACCAGCCAGTGCAAAAAGTTTGTGAACCTATTGAACTTGCTCGCATTTCAGCGGTGTTATCTATACCCATCTTGCAAAGCTACGCCTTCATGACAAAGTTGTCAGGCTTCACATTATACATAGCAATATATATTGCTACAATTCTAAGCAGTGTGATGATTGAGATAATTTCAGCTGGTTTTTTCATTGTTCAAAATAAAGCAGTGGAACAACATCAAAGGGGAATAGCTAATGGCATTTCTTTGACTGCTATGTCTGTATTCAAAGTAATTGGTCCAGCTGCAGGTGGTGCACTATTAACATTGTCACAAAAGCGATTAAATGCTAGCTTCCTTCCAGGCACCCATCTGGTCTTCTTTTCTCTCAATGTTGTTGAAGGACTTGGCGTGTTGTTGATGTTCAAACCATTCCTAAGTATAAAGAAAACATCGTCAGAGCAGTTACACTGA 1452 0.3919 MEEEKNIGQPLLKKRYYENCPGCKVDQTKELKKDVTFRNILNIWIIALCGALPIASLFPYLYFMVKDFNIAEREEDISAYGGYVGSAFMLGRCLTAILWGVIADRYGRKPVMIISIIAIVIFNTLFGLSSSFWMAVITRFILGGFNALMGTIRAYASEIFREEYQALGISTVSAAWGVGLVFGPAIGGYLAQPVEKYPKVFQRGSLWDKFPYFMPCLVISTFAFAVAIACIWLPETLHNHKVSSDNDEALENGCSGDDNDKNIQKSESLFRNWPLMSSIIVYCVFSLHDIAFSEVFSLWVVSPRRLEGLNFTTNDVGNILSVAGLAILIFQLGLYQPVQKVCEPIELARISAVLSIPILQSYAFMTKLSGFTLYIAIYIATILSSVMIEIISAGFFIVQNKAVEQHQRGIANGISLTAMSVFKVIGPAAGGALLTLSQKRLNASFLPGTHLVFFSLNVVEGLGVLLMFKPFLSIKKTSSEQLH* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0948 483 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 5 482 - -
Apr2g0948 483 SUPERFAMILY MFS general substrate transporter 38 477 IPR036259 -
Apr2g0948 483 CDD MFS_SLC46_TetA_like 43 469 - -
Apr2g0948 483 Pfam Major Facilitator Superfamily 43 427 IPR011701 GO:0022857|GO:0055085
Apr2g0948 483 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 5 482 - -
Apr2g0948 483 PRINTS Tetracycline resistance protein signature 112 136 IPR001958 GO:0022857
Apr2g0948 483 PRINTS Tetracycline resistance protein signature 169 191 IPR001958 GO:0022857
Apr2g0948 483 PRINTS Tetracycline resistance protein signature 355 378 IPR001958 GO:0022857
Apr2g0948 483 Gene3D MFS general substrate transporter like domains 35 459 IPR036259 -
Apr2g0948 483 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 475 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0948 Apr-Chr2 15484098 15494849 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0948 2 15484098 15494849 Apr2g0948 2 15484098 15494849 ECH
Apr2g0948 2 15484098 15494849 Apr5g0877 5 12860929 12867207 PCT